Protein : Qrob_P0118210.2 Q. robur
Protein Identifier  ? Qrob_P0118210.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR15615:SF15 - CYCLIN-U2-1-RELATED (PTHR15615:SF15) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s06180g 1 223 + 223 none 100.00 223 87.00 5e-144 POPTRDRAFT_572073 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s14440g 1 223 + 223 none 100.00 223 86.10 9e-144 POPTRDRAFT_816553 cyclin family protein
blastp_kegg lcl|tcc:TCM_005606 2 223 + 222 none 99.11 224 86.49 1e-143 Cyclin p3 2
blastp_kegg lcl|rcu:RCOM_1609920 1 223 + 223 Gaps:1 100.00 224 83.48 3e-139 Nuc-1 negative regulatory protein preg putative
blastp_kegg lcl|cam:101492512 1 223 + 223 Gaps:1 100.00 224 83.48 7e-136 cyclin-U2-2-like
blastp_kegg lcl|cic:CICLE_v10024289mg 1 223 + 223 none 99.11 225 82.51 3e-135 hypothetical protein
blastp_kegg lcl|cit:102619564 1 223 + 223 none 99.11 225 82.51 3e-135 cyclin-U2-2-like
blastp_kegg lcl|pxb:103935962 2 223 + 222 Gaps:3 97.83 230 83.11 5e-135 cyclin-U2-1-like
blastp_kegg lcl|mdm:103439032 2 223 + 222 Gaps:3 97.83 230 81.78 7e-133 cyclin-U2-1-like
blastp_kegg lcl|pper:PRUPE_ppa024897mg 10 223 + 214 Gaps:3 94.35 230 83.41 2e-131 hypothetical protein
blastp_pdb 2pmi_D 72 169 + 98 none 33.45 293 30.61 4e-10 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pmi_B 72 169 + 98 none 33.45 293 30.61 4e-10 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pk9_D 72 169 + 98 none 33.45 293 30.61 4e-10 mol:protein length:293 PHO85 cyclin PHO80
blastp_pdb 2pk9_B 72 169 + 98 none 33.45 293 30.61 4e-10 mol:protein length:293 PHO85 cyclin PHO80
blastp_uniprot_sprot sp|Q9M205|CCU22_ARATH 3 223 + 221 Gaps:6 98.70 230 71.37 9e-118 Cyclin-U2-2 OS Arabidopsis thaliana GN CYCU2-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHD3|CCU21_ARATH 6 223 + 218 Gaps:9 98.65 222 76.26 6e-117 Cyclin-U2-1 OS Arabidopsis thaliana GN CYCU2-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7FAT5|CCP21_ORYSJ 8 202 + 195 Gaps:6 90.78 217 52.79 7e-62 Cyclin-P2-1 OS Oryza sativa subsp. japonica GN CYCP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|O80513|CCU41_ARATH 31 189 + 159 Gaps:4 76.73 202 45.81 8e-44 Cyclin-U4-1 OS Arabidopsis thaliana GN CYCU4-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LY16|CCU42_ARATH 29 193 + 165 Gaps:4 74.54 216 41.61 1e-42 Cyclin-U4-2 OS Arabidopsis thaliana GN CYCU4-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKF6|CCU43_ARATH 29 189 + 161 Gaps:8 69.86 219 42.48 1e-39 Cyclin-U4-3 OS Arabidopsis thaliana GN CYCU4-3 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XC35|CCP41_ORYSJ 28 188 + 161 Gaps:1 75.47 212 40.62 1e-38 Cyclin-P4-1 OS Oryza sativa subsp. japonica GN CYCP4-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q75HV0|CCP31_ORYSJ 19 189 + 171 Gaps:5 70.34 236 39.16 3e-38 Cyclin-P3-1 OS Oryza sativa subsp. japonica GN CYCP3-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LJ45|CCU11_ARATH 25 189 + 165 Gaps:3 77.14 210 43.83 5e-38 Cyclin-U1-1 OS Arabidopsis thaliana GN CYCU1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LB60|CCU31_ARATH 65 213 + 149 Gaps:7 64.25 221 42.96 4e-34 Cyclin-U3-1 OS Arabidopsis thaliana GN CYCU3-1 PE 1 SV 2
rpsblast_cdd gnl|CDD|204002 29 169 + 141 Gaps:5 100.00 140 33.57 7e-23 pfam08613 Cyclin Cyclin. This family includes many different cyclin proteins. Members include the G1/S-specific cyclin pas1 and the phosphate system cyclin PHO80/PHO85.
rpsblast_cdd gnl|CDD|201025 79 169 + 91 Gaps:5 70.87 127 27.78 1e-09 pfam00134 Cyclin_N Cyclin N-terminal domain. Cyclins regulate cyclin dependent kinases (CDKs). Human cyclin-O is a Uracil-DNA glycosylase that is related to other cyclins. Cyclins contain two domains of similar all-alpha fold of which this family corresponds with the N-terminal domain.
rpsblast_kog gnl|CDD|36887 1 206 + 206 Gaps:13 98.62 218 36.28 3e-40 KOG1674 KOG1674 KOG1674 Cyclin [General function prediction only].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 78 170 93 SSF47954 none none IPR013763
PANTHER 1 209 209 PTHR15615:SF15 none none none
PANTHER 1 209 209 PTHR15615 none none none
Pfam 31 169 139 PF08613 none Cyclin IPR013922
Gene3D 88 170 83 G3DSA:1.10.472.10 none none IPR013763
PIRSF 5 221 217 PIRSF027110 none none IPR012389

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting