Protein : Qrob_P0118180.2 Q. robur
Protein Identifier  ? Qrob_P0118180.2 Organism . Name  Quercus robur
Score  93.1 Score Type  egn
Protein Description  (M=10) PTHR19241:SF166 - ABC TRANSPORTER G FAMILY MEMBER 12-RELATED (PTHR19241:SF166) Code Enzyme  EC:3.6.3.44
Gene Prediction Quality  validated Protein length 

Sequence

Length: 252  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_013440 1 226 + 226 Gaps:1 31.34 718 90.67 4e-136 White-brown complex protein 11
blastp_kegg lcl|rcu:RCOM_0612740 5 226 + 222 none 31.49 705 90.54 7e-136 ATP-binding cassette transporter putative (EC:3.6.3.28)
blastp_kegg lcl|pop:POPTR_0017s03590g 3 226 + 224 Gaps:1 34.04 661 88.44 6e-133 hypothetical protein
blastp_kegg lcl|vvi:100263167 6 226 + 221 none 31.35 705 89.14 2e-132 ABC transporter G family member 11-like
blastp_kegg lcl|pmum:103343739 2 226 + 225 none 31.82 707 87.11 1e-130 ABC transporter G family member 11
blastp_kegg lcl|cmo:103482752 12 226 + 215 none 30.89 696 88.84 1e-129 ABC transporter G family member 11
blastp_kegg lcl|csv:101230225 12 226 + 215 none 30.89 696 88.84 2e-129 ABC transporter G family member 11-like
blastp_kegg lcl|csv:101212752 12 226 + 215 none 30.89 696 88.84 2e-129 ABC transporter G family member 11-like
blastp_kegg lcl|cit:102607152 1 226 + 226 none 32.01 706 85.40 2e-129 ABC transporter G family member 11-like
blastp_kegg lcl|cic:CICLE_v10019080mg 1 226 + 226 none 32.01 706 85.40 2e-129 hypothetical protein
blastp_pdb 3nhb_A 61 240 + 180 Gaps:21 61.76 306 32.80 6e-14 mol:protein length:306 ATP-binding cassette sub-family B member 6 m
blastp_pdb 3nha_A 61 240 + 180 Gaps:21 61.76 306 32.80 6e-14 mol:protein length:306 ATP-binding cassette sub-family B member 6 m
blastp_pdb 3nh9_A 61 240 + 180 Gaps:21 61.76 306 32.80 6e-14 mol:protein length:306 ATP-binding cassette sub-family B member 6 m
blastp_pdb 3nh6_A 61 240 + 180 Gaps:21 61.76 306 32.80 6e-14 mol:protein length:306 ATP-binding cassette sub-family B member 6 m
blastp_pdb 1mv5_D 61 226 + 166 Gaps:11 67.90 243 30.30 7e-14 mol:protein length:243 Multidrug resistance ABC transporter ATP-bind
blastp_pdb 1mv5_C 61 226 + 166 Gaps:11 67.90 243 30.30 7e-14 mol:protein length:243 Multidrug resistance ABC transporter ATP-bind
blastp_pdb 1mv5_B 61 226 + 166 Gaps:11 67.90 243 30.30 7e-14 mol:protein length:243 Multidrug resistance ABC transporter ATP-bind
blastp_pdb 1mv5_A 61 226 + 166 Gaps:11 67.90 243 30.30 7e-14 mol:protein length:243 Multidrug resistance ABC transporter ATP-bind
blastp_pdb 2ixf_D 59 230 + 172 Gaps:21 63.10 271 36.26 4e-13 mol:protein length:271 ANTIGEN PEPTIDE TRANSPORTER 1
blastp_pdb 2ixf_C 59 230 + 172 Gaps:21 63.10 271 36.26 4e-13 mol:protein length:271 ANTIGEN PEPTIDE TRANSPORTER 1
blastp_uniprot_sprot sp|Q8RXN0|AB11G_ARATH 12 226 + 215 Gaps:8 31.72 703 82.51 6e-121 ABC transporter G family member 11 OS Arabidopsis thaliana GN ABCG11 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWI9|AB15G_ARATH 50 226 + 177 Gaps:1 25.76 691 64.61 1e-73 ABC transporter G family member 15 OS Arabidopsis thaliana GN ABCG15 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C8K2|AB12G_ARATH 50 226 + 177 Gaps:1 25.91 687 64.04 3e-72 ABC transporter G family member 12 OS Arabidopsis thaliana GN ABCG12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C8J8|AB13G_ARATH 52 226 + 175 Gaps:1 25.96 678 62.50 2e-69 ABC transporter G family member 13 OS Arabidopsis thaliana GN ABCG13 PE 2 SV 1
blastp_uniprot_sprot sp|Q55DW4|ABCG1_DICDI 70 226 + 157 Gaps:6 20.05 793 51.57 5e-43 ABC transporter G family member 1 OS Dictyostelium discoideum GN abcG1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZUU9|AB3G_ARATH 50 230 + 181 Gaps:3 24.66 730 43.89 4e-42 ABC transporter G family member 3 OS Arabidopsis thaliana GN ABCG3 PE 1 SV 2
blastp_uniprot_sprot sp|Q84TH5|AB25G_ARATH 67 226 + 160 Gaps:2 24.17 662 52.50 1e-40 ABC transporter G family member 25 OS Arabidopsis thaliana GN ABCG25 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M2V5|AB18G_ARATH 52 230 + 179 Gaps:13 26.84 708 45.26 3e-40 ABC transporter G family member 18 OS Arabidopsis thaliana GN ABCG18 PE 2 SV 1
blastp_uniprot_sprot sp|Q7TMS5|ABCG2_MOUSE 46 226 + 181 Gaps:12 27.85 657 45.36 1e-39 ATP-binding cassette sub-family G member 2 OS Mus musculus GN Abcg2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8MIB3|ABCG2_PIG 50 226 + 177 Gaps:10 27.90 656 44.26 2e-39 ATP-binding cassette sub-family G member 2 OS Sus scrofa GN ABCG2 PE 2 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 51 231 181 SSF52540 none none IPR027417
Pfam 74 223 150 PF00005 none ABC transporter IPR003439
Gene3D 56 230 175 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 52 246 195 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
ProSitePatterns 195 209 15 PS00211 none ABC transporters family signature. IPR017871
PANTHER 45 226 182 PTHR19241:SF166 none none none
SMART 81 247 167 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PANTHER 45 226 182 PTHR19241 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting