Protein : Qrob_P0116320.2 Q. robur
Protein Identifier  ? Qrob_P0116320.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) PF13202 - EF hand Gene Prediction Quality  validated
Protein length 

Sequence

Length: 254  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034157 1 234 + 234 Gaps:28 23.06 798 65.22 3e-53 Calcium-binding tetratricopeptide family protein
blastp_kegg lcl|cic:CICLE_v10000324mg 1 235 + 235 Gaps:28 23.06 798 67.39 6e-53 hypothetical protein
blastp_kegg lcl|mtr:MTR_1g045490 1 251 + 251 Gaps:30 22.24 832 68.11 6e-53 TPR repeat-containing protein putative
blastp_kegg lcl|cit:102611369 1 235 + 235 Gaps:28 23.06 798 67.39 1e-52 uncharacterized LOC102611369
blastp_kegg lcl|pxb:103930115 1 246 + 246 Gaps:27 22.73 792 67.22 2e-52 uncharacterized TPR repeat-containing protein At1g05150-like
blastp_kegg lcl|pmum:103321297 1 233 + 233 Gaps:27 22.96 797 63.39 1e-51 uncharacterized TPR repeat-containing protein At1g05150-like
blastp_kegg lcl|pper:PRUPE_ppa001586mg 1 233 + 233 Gaps:27 22.96 797 63.39 1e-51 hypothetical protein
blastp_kegg lcl|cmo:103501003 1 252 + 252 Gaps:31 23.06 798 66.30 4e-51 uncharacterized TPR repeat-containing protein At1g05150-like
blastp_kegg lcl|mdm:103450419 1 246 + 246 Gaps:29 23.14 795 65.22 5e-51 uncharacterized TPR repeat-containing protein At1g05150-like
blastp_kegg lcl|mdm:103450417 1 246 + 246 Gaps:29 23.14 795 65.22 5e-51 uncharacterized TPR repeat-containing protein At1g05150-like
blastp_uniprot_sprot sp|O23052|Y1515_ARATH 1 250 + 250 Gaps:33 23.14 808 65.24 9e-49 Uncharacterized TPR repeat-containing protein At1g05150 OS Arabidopsis thaliana GN At1g05150 PE 1 SV 1
blastp_uniprot_sprot sp|Q8S8L9|Y2245_ARATH 1 250 + 250 Gaps:29 22.69 802 65.38 1e-48 Uncharacterized TPR repeat-containing protein At2g32450 OS Arabidopsis thaliana GN At2g32450 PE 1 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 154 197 44 G3DSA:1.10.238.10 none none IPR011992
SUPERFAMILY 102 206 105 SSF47473 none none none
ProSiteProfiles 136 171 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 107 153 47 G3DSA:1.10.238.10 none none IPR011992
Pfam 142 165 24 PF13202 none EF hand IPR002048
SMART 140 168 29 SM00054 none EF-hand, calcium binding motif IPR002048

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting