Protein : Qrob_P0116290.2 Q. robur
Protein Identifier  ? Qrob_P0116290.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR22999:SF18 - PX DOMAIN-CONTAINING PROTEIN KINASE-LIKE PROTEIN (PTHR22999:SF18) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1040  
Kegg Orthology  K17925
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0035091 phosphatidylinositol binding Interacting selectively and non-covalently with any inositol-containing glycerophospholipid, i.e. phosphatidylinositol (PtdIns) and its phosphorylated derivatives.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103335464 1 1036 + 1036 Gaps:49 99.61 1027 71.16 0.0 uncharacterized LOC103335464
blastp_kegg lcl|pper:PRUPE_ppa000718mg 1 1036 + 1036 Gaps:42 99.61 1024 71.57 0.0 hypothetical protein
blastp_kegg lcl|pxb:103934393 1 1036 + 1036 Gaps:57 99.60 1005 70.63 0.0 uncharacterized LOC103934393
blastp_kegg lcl|tcc:TCM_006977 1 1033 + 1033 Gaps:26 99.42 1041 69.08 0.0 Phox-associated domain Phox-like Sorting nexin isoform 2
blastp_kegg lcl|pxb:103937296 1 1036 + 1036 Gaps:55 99.60 1003 70.47 0.0 uncharacterized LOC103937296
blastp_kegg lcl|mdm:103402277 1 1036 + 1036 Gaps:54 99.60 1012 69.54 0.0 uncharacterized LOC103402277
blastp_kegg lcl|rcu:RCOM_0939510 1 1038 + 1038 Gaps:53 99.90 1032 67.99 0.0 hypothetical protein
blastp_kegg lcl|mdm:103425866 1 1036 + 1036 Gaps:63 99.60 999 69.75 0.0 uncharacterized LOC103425866
blastp_kegg lcl|fve:101300409 2 1033 + 1032 Gaps:47 99.12 1024 68.87 0.0 uncharacterized protein LOC101300409
blastp_kegg lcl|vvi:100260575 1 1033 + 1033 Gaps:54 99.90 1002 69.23 0.0 uncharacterized LOC100260575
blastp_uniprot_sprot sp|Q6PHS6|SNX13_MOUSE 100 342 + 243 Gaps:36 24.76 957 27.43 7e-09 Sorting nexin-13 OS Mus musculus GN Snx13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y5W8|SNX13_HUMAN 100 342 + 243 Gaps:40 24.48 968 27.00 5e-08 Sorting nexin-13 OS Homo sapiens GN SNX13 PE 1 SV 4
rpsblast_cdd gnl|CDD|132782 564 662 + 99 Gaps:7 99.07 107 63.21 1e-43 cd06872 PX_SNX19_like_plant The phosphoinositide binding Phox Homology domain of uncharacterized SNX19-like plant proteins. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to PI-enriched membranes. Members in this subfamily are uncharacterized plant proteins containing an N-terminal PXA domain a central PX domain and a C-terminal domain that is conserved in some sorting nexins (SNXs). This is the same domain architecture found in SNX19. SNX13 and SNX14 also contain these three domains but also contain a regulator of G protein signaling (RGS) domain in between the PXA and PX domains. SNXs make up the largest group among PX domain containing proteins. They are involved in regulating membrane traffic and protein sorting in the endosomal system. The PX domain of SNXs binds PIs and targets the protein to PI-enriched membranes. SNXs differ from each other in PI-binding specificity and affinity and the presence of other protein-protein interaction domains which help determine subcellular localization and specific function in the endocytic pathway. In addition to protein-lipid interaction the PX domain may also be involved in protein-protein interaction.
rpsblast_cdd gnl|CDD|202146 105 284 + 180 Gaps:5 98.35 182 39.11 3e-42 pfam02194 PXA PXA domain. This domain is associated with PX domains pfam00787.
rpsblast_cdd gnl|CDD|128608 106 283 + 178 Gaps:18 96.59 176 22.94 3e-14 smart00313 PXA Domain associated with PX domains. unpubl. observations.
rpsblast_cdd gnl|CDD|132768 566 661 + 96 Gaps:10 98.11 106 32.69 6e-13 cd06093 PX_domain The Phox Homology domain a phosphoinositide binding module. The PX domain is a phosphoinositide (PI) binding module involved in targeting proteins to membranes. Proteins containing PX domains interact with PIs and have been implicated in highly diverse functions such as cell signaling vesicular trafficking protein sorting lipid modification cell polarity and division activation of T and B cells and cell survival. Many members of this superfamily bind phosphatidylinositol-3-phosphate (PI3P) but in some cases other PIs such as PI4P or PI(3 4)P2 among others are the preferred substrates. In addition to protein-lipid interaction the PX domain may also be involved in protein-protein interaction as in the cases of p40phox p47phox and some sorting nexins (SNXs). The PX domain is conserved from yeast to humans and is found in more than 100 proteins. The majority of PX domain-containing proteins are SNXs which play important roles in endosomal sorting.
rpsblast_cdd gnl|CDD|201443 578 663 + 86 Gaps:11 87.16 109 30.53 2e-10 pfam00787 PX PX domain. PX domains bind to phosphoinositides.
rpsblast_kog gnl|CDD|37312 790 915 + 126 none 34.81 362 19.05 2e-08 KOG2101 KOG2101 KOG2101 Intermediate filament-like protein sorting nexins and related proteins containing PX (PhoX) domain(s) [Cytoskeleton Intracellular trafficking secretion and vesicular transport Cell cycle control cell division chromosome partitioning].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 839 1037 199 PTHR22999 none none none
SMART 105 288 184 SM00313 none Domain associated with PX domains IPR013996
Pfam 575 662 88 PF00787 none PX domain IPR001683
PANTHER 548 751 204 PTHR22999:SF18 none none none
PANTHER 1 303 303 PTHR22999:SF18 none none none
PANTHER 839 1037 199 PTHR22999:SF18 none none none
Phobius 39 57 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 303 303 PTHR22999 none none none
Phobius 1 15 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 16 33 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 548 751 204 PTHR22999 none none none
PANTHER 363 446 84 PTHR22999 none none none
Pfam 860 1003 144 PF08628 none Sorting nexin C terminal IPR013937
Gene3D 562 665 104 G3DSA:3.30.1520.10 none none IPR001683
Phobius 58 1039 982 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 564 664 101 SSF64268 none none IPR001683
Phobius 34 38 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSiteProfiles 105 288 184 PS51207 none PXA domain profile. IPR003114
Pfam 105 283 179 PF02194 none PXA domain IPR003114
ProSiteProfiles 562 667 106 PS50195 none PX domain profile. IPR001683
PANTHER 363 446 84 PTHR22999:SF18 none none none

1 Localization

Analysis Start End Length
TMHMM 19 36 17

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 5 0.625 0.027 NON-PLANT 35