Protein : Qrob_P0115770.2 Q. robur
Protein Identifier  ? Qrob_P0115770.2 Organism . Name  Quercus robur
Score  8.0 Score Type  egn
Protein Description  (M=21) KOG0444//KOG0472//KOG0531//KOG0532//KOG0617//KOG0618//KOG3207//KOG4194//KOG4237//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms]. // Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton]. // Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Beta-tubulin folding cofactor E [Posttranslational modification protein turnover chaperones]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Extracellular matrix protein slit contains leucine-rich and EGF-like repeats [Extracellular structures Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1197  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0004601 peroxidase activity Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O.
GO:0006979 response to oxidative stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326651 32 1038 + 1007 Gaps:77 95.50 1001 53.35 0.0 receptor-like protein 12
blastp_kegg lcl|pmum:103326645 32 1038 + 1007 Gaps:73 95.65 989 53.07 0.0 receptor-like protein 12
blastp_kegg lcl|pmum:103343889 32 1027 + 996 Gaps:45 94.54 1044 53.39 0.0 receptor-like protein 12
blastp_kegg lcl|tcc:TCM_031917 31 1038 + 1008 Gaps:81 94.85 990 52.50 0.0 Receptor like protein 6 putative
blastp_kegg lcl|tcc:TCM_032520 28 1038 + 1011 Gaps:120 92.64 1210 45.05 0.0 Receptor like protein 27
blastp_kegg lcl|vvi:100261089 1 1038 + 1038 Gaps:65 98.40 1001 50.25 0.0 receptor-like protein 12-like
blastp_kegg lcl|pmum:103326643 84 1038 + 955 Gaps:63 99.34 904 54.34 0.0 receptor-like protein 12
blastp_kegg lcl|mtr:MTR_5g087320 32 1031 + 1000 Gaps:79 95.20 1020 51.39 0.0 Receptor-like protein kinase
blastp_kegg lcl|tcc:TCM_030697 20 1031 + 1012 Gaps:76 95.24 1029 49.49 0.0 Receptor like protein 6 putative
blastp_kegg lcl|pmum:103326740 84 1031 + 948 Gaps:69 98.23 905 53.66 0.0 receptor-like protein 12
blastp_pdb 3rj0_A 62 969 + 908 Gaps:363 93.78 772 51.93 2e-47 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 62 969 + 908 Gaps:363 93.78 772 51.93 2e-47 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 62 969 + 908 Gaps:363 94.27 768 51.93 2e-47 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 62 969 + 908 Gaps:363 94.27 768 51.93 2e-47 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 32 970 + 939 Gaps:246 99.36 313 63.34 2e-18 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_pdb 3ciy_B 137 919 + 783 Gaps:263 86.94 697 49.50 5e-12 mol:protein length:697 Toll-like receptor 3
blastp_pdb 3ciy_A 137 919 + 783 Gaps:263 86.94 697 49.50 5e-12 mol:protein length:697 Toll-like receptor 3
blastp_pdb 3cig_A 137 919 + 783 Gaps:263 86.94 697 49.50 5e-12 mol:protein length:697 Toll-like receptor 3
blastp_pdb 2z63_A 351 533 + 183 Gaps:10 32.46 570 34.59 5e-11 mol:protein length:570 Toll-like receptor 4 Variable lymphocyte rec
blastp_pdb 2a0z_A 214 942 + 729 Gaps:224 80.57 705 41.02 6e-09 mol:protein length:705 Toll-like receptor 3
blastp_uniprot_sprot sp|Q9C9H7|RLP12_ARATH 25 1038 + 1014 Gaps:191 96.10 847 50.37 1e-102 Receptor-like protein 12 OS Arabidopsis thaliana GN RLP12 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGQ5|GSO1_ARATH 86 969 + 884 Gaps:296 65.01 1249 51.48 2e-79 LRR receptor-like serine/threonine-protein kinase GSO1 OS Arabidopsis thaliana GN GSO1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL28|FLS2_ARATH 74 963 + 890 Gaps:229 61.98 1173 54.33 4e-68 LRR receptor-like serine/threonine-protein kinase FLS2 OS Arabidopsis thaliana GN FLS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FIZ3|GSO2_ARATH 98 967 + 870 Gaps:338 63.90 1252 55.12 7e-67 LRR receptor-like serine/threonine-protein kinase GSO2 OS Arabidopsis thaliana GN GSO2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZPS9|BRL2_ARATH 67 990 + 924 Gaps:378 59.93 1143 50.22 8e-66 Serine/threonine-protein kinase BRI1-like 2 OS Arabidopsis thaliana GN BRL2 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGS2|Y4361_ARATH 66 970 + 905 Gaps:176 61.53 1136 46.49 6e-62 Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS Arabidopsis thaliana GN At4g36180 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LYN8|EXS_ARATH 87 1039 + 953 Gaps:307 65.94 1192 51.53 4e-60 Leucine-rich repeat receptor protein kinase EXS OS Arabidopsis thaliana GN EXS PE 1 SV 1
blastp_uniprot_sprot sp|Q9FZ59|PEPR2_ARATH 76 962 + 887 Gaps:309 59.47 1088 60.90 7e-60 Leucine-rich repeat receptor-like protein kinase PEPR2 OS Arabidopsis thaliana GN PEPR2 PE 1 SV 1
blastp_uniprot_sprot sp|O49318|Y2317_ARATH 74 963 + 890 Gaps:215 58.63 1124 51.29 1e-59 Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS Arabidopsis thaliana GN At2g33170 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVP0|Y5639_ARATH 74 984 + 911 Gaps:285 60.71 1102 57.55 5e-59 Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS Arabidopsis thaliana GN At5g63930 PE 1 SV 1

93 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 575 588 14 PR00019 none Leucine-rich repeat signature none
PRINTS 900 913 14 PR00019 none Leucine-rich repeat signature none
ProSiteProfiles 215 237 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 715 737 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 739 760 22 PS51450 none Leucine-rich repeat profile. IPR001611
Pfam 264 283 20 PF13516 none Leucine Rich repeat none
SMART 737 763 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 472 495 24 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 900 921 22 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 285 307 23 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 496 526 31 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 664 690 27 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 572 587 16 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 160 190 31 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
SMART 423 446 24 SM00365 none Leucine-rich repeat, SDS22-like subfamily none
ProSiteProfiles 190 211 22 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 330 352 23 PS51450 none Leucine-rich repeat profile. IPR001611
ProSiteProfiles 354 375 22 PS51450 none Leucine-rich repeat profile. IPR001611
Phobius 4 14 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 652 752 101 PTHR24420 none none none
Phobius 999 1019 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 400 422 23 PS51450 none Leucine-rich repeat profile. IPR001611
Gene3D 701 817 117 G3DSA:3.80.10.10 none none none
Gene3D 33 320 288 G3DSA:3.80.10.10 none none none
Gene3D 858 966 109 G3DSA:3.80.10.10 none none none
Gene3D 548 700 153 G3DSA:3.80.10.10 none none none
Gene3D 323 535 213 G3DSA:3.80.10.10 none none none
PANTHER 366 490 125 PTHR24420 none none none
PANTHER 223 256 34 PTHR24420 none none none
PANTHER 573 583 11 PTHR24420 none none none

4 Localization

Analysis Start End Length
TMHMM 999 1021 22
SignalP_GRAM_POSITIVE 1 22 21
SignalP_GRAM_NEGATIVE 1 20 19
SignalP_EUK 1 22 21

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 2 0.866 0.044 NON-PLANT 22