Protein : Qrob_P0115430.2 Q. robur
Protein Identifier  ? Qrob_P0115430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=49) PTHR24420//PTHR24420:SF583 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 644  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103931344 26 643 + 618 Gaps:7 74.14 843 69.60 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|fve:101302526 27 641 + 615 Gaps:25 73.34 829 67.93 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like
blastp_kegg lcl|pper:PRUPE_ppa001372mg 8 643 + 636 Gaps:7 76.37 842 67.19 0.0 hypothetical protein
blastp_kegg lcl|pmum:103336072 32 643 + 612 Gaps:7 73.52 842 68.66 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|mdm:103443894 26 643 + 618 Gaps:9 74.20 845 68.74 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|pxb:103940035 24 643 + 620 Gaps:15 74.71 850 68.50 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|mdm:103444832 26 643 + 618 Gaps:7 74.14 843 67.68 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|mdm:103443895 1 643 + 643 Gaps:9 77.07 846 66.56 0.0 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
blastp_kegg lcl|rcu:RCOM_1175670 27 638 + 612 Gaps:18 73.80 851 64.97 0.0 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor putative (EC:2.7.10.2)
blastp_kegg lcl|cic:CICLE_v10003606mg 26 633 + 608 Gaps:15 72.65 852 68.17 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9XID3|Y1343_ARATH 26 622 + 597 Gaps:18 72.26 829 57.26 8e-176 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS Arabidopsis thaliana GN At1g34300 PE 1 SV 1
blastp_uniprot_sprot sp|P93756|SD31_ARATH 21 578 + 558 Gaps:34 66.75 764 32.16 2e-40 G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 OS Arabidopsis thaliana GN SD31 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 33 581 + 549 Gaps:68 66.97 872 31.85 2e-36 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 8 495 + 488 Gaps:83 65.97 817 29.31 8e-28 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|O64477|Y2913_ARATH 43 587 + 545 Gaps:80 67.15 828 31.47 3e-25 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS Arabidopsis thaliana GN At2g19130 PE 2 SV 1
blastp_uniprot_sprot sp|O64778|Y1142_ARATH 43 497 + 455 Gaps:63 58.24 807 27.66 9e-20 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS Arabidopsis thaliana GN At1g61420 PE 3 SV 2
blastp_uniprot_sprot sp|O81905|SD18_ARATH 24 365 + 342 Gaps:55 42.94 850 29.32 2e-18 Receptor-like serine/threonine-protein kinase SD1-8 OS Arabidopsis thaliana GN SD18 PE 1 SV 1
blastp_uniprot_sprot sp|P22552|SLSG1_BRAOA 1 402 + 402 Gaps:75 97.97 444 27.59 7e-18 S-locus-specific glycoprotein BS29-1 OS Brassica oleracea var. alboglabra GN SLSG PE 2 SV 1
blastp_uniprot_sprot sp|Q39202|RLK1_ARATH 7 579 + 573 Gaps:97 72.48 832 26.53 2e-17 G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS Arabidopsis thaliana GN RLK1 PE 2 SV 2
blastp_uniprot_sprot sp|Q39203|SD22_ARATH 42 568 + 527 Gaps:68 64.62 797 29.71 6e-17 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS Arabidopsis thaliana GN SD22 PE 1 SV 1
rpsblast_cdd gnl|CDD|201803 76 173 + 98 Gaps:9 88.99 109 42.27 2e-14 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|28910 39 146 + 108 Gaps:5 97.41 116 36.28 1e-11 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..
rpsblast_cdd gnl|CDD|128418 43 145 + 103 Gaps:6 93.86 114 36.45 1e-10 smart00108 B_lectin Bulb-type mannose-specific lectin.
rpsblast_kog gnl|CDD|36401 499 574 + 76 Gaps:1 21.33 361 27.27 4e-10 KOG1187 KOG1187 KOG1187 Serine/threonine protein kinase [Signal transduction mechanisms].

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 35 146 112 SM00108 none Bulb-type mannose-specific lectin IPR001480
Pfam 76 158 83 PF01453 none D-mannose binding lectin IPR001480
Phobius 425 448 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 229 303 75 PTHR24420:SF583 none none none
Gene3D 153 269 117 G3DSA:2.90.10.10 none none IPR001480
Gene3D 29 152 124 G3DSA:2.90.10.10 none none IPR001480
Phobius 20 27 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 51 72 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 229 303 75 PTHR24420 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 233 295 63 PF00954 none S-locus glycoprotein family IPR000858
PANTHER 415 617 203 PTHR24420 none none none
PANTHER 415 617 203 PTHR24420:SF583 none none none
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 78 191 114 SSF51110 none none IPR001480
Phobius 73 424 352 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 375 497 123 G3DSA:2.60.120.200 none none IPR013320
Phobius 449 643 195 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 28 50 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSiteProfiles 27 145 119 PS50927 none Bulb-type lectin domain profile. IPR001480

5 Localization

Analysis Start End Length
TMHMM 9 31 22
TMHMM 426 448 22
TMHMM 51 73 22
SignalP_GRAM_POSITIVE 1 27 26
SignalP_EUK 1 27 26

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 27   Secretory pathway 1 0.982 0.019 NON-PLANT 27