Protein : Qrob_P0115010.2 Q. robur
Protein Identifier  ? Qrob_P0115010.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=34) K05391 - cyclic nucleotide gated channel, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 614  
Kegg Orthology  K05391
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103929332 1 603 + 603 Gaps:22 86.09 719 72.37 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|fve:101292339 1 603 + 603 Gaps:18 86.09 719 71.41 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pmum:103332242 7 603 + 597 Gaps:25 85.16 721 73.62 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa002071mg 7 603 + 597 Gaps:25 85.16 721 72.96 0.0 hypothetical protein
blastp_kegg lcl|mdm:103414450 1 603 + 603 Gaps:24 86.13 721 71.34 0.0 cyclic nucleotide-gated ion channel 1
blastp_kegg lcl|mdm:103439360 1 603 + 603 Gaps:24 86.73 716 70.69 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa026143mg 7 603 + 597 Gaps:41 85.52 739 69.94 0.0 hypothetical protein
blastp_kegg lcl|pmum:103332244 7 603 + 597 Gaps:25 85.16 721 71.34 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pop:POPTR_0014s09350g 1 607 + 607 Gaps:22 86.45 723 67.04 0.0 POPTRDRAFT_1098575 hypothetical protein
blastp_kegg lcl|mdm:103406226 53 603 + 551 Gaps:6 68.36 806 75.32 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_pdb 1wgp_A 469 592 + 124 none 90.51 137 69.35 1e-54 mol:protein length:137 Probable cyclic nucleotide-gated ion channel
blastp_pdb 2ptm_A 404 545 + 142 Gaps:6 68.69 198 26.47 4e-11 mol:protein length:198 Hyperpolarization-activated (Ih) channel
blastp_pdb 3u0z_B 408 545 + 138 Gaps:7 62.38 210 29.01 4e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u0z_A 408 545 + 138 Gaps:7 62.38 210 29.01 4e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_B 408 545 + 138 Gaps:7 62.38 210 29.01 6e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_A 408 545 + 138 Gaps:7 62.38 210 29.01 6e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3otf_A 408 545 + 138 Gaps:7 59.55 220 29.01 7e-10 mol:protein length:220 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u10_A 408 545 + 138 Gaps:7 62.38 210 28.24 2e-09 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_B 408 545 + 138 Gaps:7 64.85 202 28.24 2e-09 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_A 408 545 + 138 Gaps:7 64.85 202 28.24 2e-09 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_uniprot_sprot sp|O65717|CNGC1_ARATH 1 603 + 603 Gaps:22 85.89 716 67.48 0.0 Cyclic nucleotide-gated ion channel 1 OS Arabidopsis thaliana GN CNGC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LNJ0|CNG10_ARATH 1 603 + 603 Gaps:3 84.67 711 66.11 0.0 Probable cyclic nucleotide-gated ion channel 10 OS Arabidopsis thaliana GN CNGC10 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LD40|CNG13_ARATH 1 603 + 603 Gaps:18 86.64 696 66.33 0.0 Putative cyclic nucleotide-gated ion channel 13 OS Arabidopsis thaliana GN CNGC13 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SKD7|CNGC3_ARATH 69 603 + 535 Gaps:2 75.50 706 66.60 0.0 Probable cyclic nucleotide-gated ion channel 3 OS Arabidopsis thaliana GN CNGC3 PE 2 SV 2
blastp_uniprot_sprot sp|O82226|CNGC6_ARATH 4 603 + 600 Gaps:30 83.80 747 55.11 0.0 Probable cyclic nucleotide-gated ion channel 6 OS Arabidopsis thaliana GN CNGC6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9M0A4|CNGC9_ARATH 67 603 + 537 Gaps:17 73.94 733 61.25 0.0 Putative cyclic nucleotide-gated ion channel 9 OS Arabidopsis thaliana GN CNGC9 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWS9|CNGC5_ARATH 1 603 + 603 Gaps:28 87.45 717 54.70 0.0 Probable cyclic nucleotide-gated ion channel 5 OS Arabidopsis thaliana GN CNGC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FXH6|CNGC8_ARATH 5 603 + 599 Gaps:38 83.27 753 51.99 0.0 Putative cyclic nucleotide-gated ion channel 8 OS Arabidopsis thaliana GN CNGC8 PE 3 SV 2
blastp_uniprot_sprot sp|Q9S9N5|CNGC7_ARATH 4 603 + 600 Gaps:24 84.28 738 51.77 0.0 Putative cyclic nucleotide-gated ion channel 7 OS Arabidopsis thaliana GN CNGC7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SL29|CNG15_ARATH 66 603 + 538 Gaps:14 79.06 678 56.72 0.0 Putative cyclic nucleotide-gated ion channel 15 OS Arabidopsis thaliana GN CNGC15 PE 3 SV 1

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 389 613 225 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 274 274 PTHR10217:SF465 none none none
Phobius 248 267 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 474 558 85 PS50042 none cAMP/cGMP binding motif profile. IPR000595
Phobius 139 171 33 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 83 104 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 274 274 PTHR10217 none none none
Phobius 1 82 82 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 105 115 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 124 391 268 PF00520 none Ion transport protein IPR005821
PANTHER 324 603 280 PTHR10217:SF465 none none none
Pfam 495 576 82 PF00027 none Cyclic nucleotide-binding domain IPR000595
Gene3D 404 465 62 G3DSA:1.10.287.630 none none none
Phobius 116 138 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 366 388 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 268 365 98 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 474 605 132 SM00100 none Cyclic nucleotide-monophosphate binding domain IPR000595
Gene3D 472 590 119 G3DSA:2.60.120.10 none none IPR014710
Phobius 192 247 56 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 79 269 191 G3DSA:1.10.287.70 none none none
Gene3D 336 396 61 G3DSA:1.10.287.70 none none none
SUPERFAMILY 336 396 61 SSF81324 none none none
SUPERFAMILY 71 270 200 SSF81324 none none none
Phobius 172 191 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 403 596 194 SSF51206 none none IPR018490
PANTHER 324 603 280 PTHR10217 none none none

5 Localization

Analysis Start End Length
TMHMM 116 138 22
TMHMM 244 266 22
TMHMM 170 192 22
TMHMM 83 101 18
TMHMM 366 388 22

0 Qtllist

0 Targeting