Protein : Qrob_P0114990.2 Q. robur
Protein Identifier  ? Qrob_P0114990.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=34) K05391 - cyclic nucleotide gated channel, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 710  
Kegg Orthology  K05391
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332242 1 708 + 708 Gaps:66 99.58 721 62.12 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pxb:103929332 1 708 + 708 Gaps:63 99.72 719 60.67 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa002071mg 1 679 + 679 Gaps:45 92.65 721 63.77 0.0 hypothetical protein
blastp_kegg lcl|mdm:103414450 1 679 + 679 Gaps:44 92.79 721 62.93 0.0 cyclic nucleotide-gated ion channel 1
blastp_kegg lcl|fve:101292339 1 679 + 679 Gaps:48 92.77 719 62.07 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|pper:PRUPE_ppa026143mg 1 708 + 708 Gaps:82 99.59 739 59.65 0.0 hypothetical protein
blastp_kegg lcl|pmum:103332244 1 679 + 679 Gaps:45 92.65 721 63.17 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|mdm:103439360 1 708 + 708 Gaps:60 99.72 716 60.08 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_kegg lcl|cic:CICLE_v10019048mg 1 709 + 709 Gaps:71 100.00 722 58.73 0.0 hypothetical protein
blastp_kegg lcl|cit:102618760 1 709 + 709 Gaps:71 100.00 722 58.73 0.0 cyclic nucleotide-gated ion channel 1-like
blastp_pdb 1wgp_A 476 599 + 124 Gaps:2 91.97 137 61.90 2e-44 mol:protein length:137 Probable cyclic nucleotide-gated ion channel
blastp_pdb 3u0z_B 417 552 + 136 Gaps:5 62.38 210 29.77 8e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u0z_A 417 552 + 136 Gaps:5 62.38 210 29.77 8e-10 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_B 417 550 + 134 Gaps:1 63.33 210 27.82 3e-09 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u11_A 417 550 + 134 Gaps:1 63.33 210 27.82 3e-09 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3otf_A 417 550 + 134 Gaps:1 60.45 220 27.82 3e-09 mol:protein length:220 Potassium/sodium hyperpolarization-activated
blastp_pdb 3u10_A 417 552 + 136 Gaps:7 62.38 210 30.53 4e-09 mol:protein length:210 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_B 417 552 + 136 Gaps:7 64.85 202 30.53 4e-09 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 3ffq_A 417 552 + 136 Gaps:7 64.85 202 30.53 4e-09 mol:protein length:202 Potassium/sodium hyperpolarization-activated
blastp_pdb 1q5o_A 417 552 + 136 Gaps:7 63.29 207 30.53 4e-09 mol:protein length:207 Potassium/sodium hyperpolarization-activated
blastp_uniprot_sprot sp|O65717|CNGC1_ARATH 1 709 + 709 Gaps:79 100.00 716 58.24 0.0 Cyclic nucleotide-gated ion channel 1 OS Arabidopsis thaliana GN CNGC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LNJ0|CNG10_ARATH 19 708 + 690 Gaps:71 99.16 711 54.89 0.0 Probable cyclic nucleotide-gated ion channel 10 OS Arabidopsis thaliana GN CNGC10 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LD40|CNG13_ARATH 29 705 + 677 Gaps:71 96.55 696 56.55 0.0 Putative cyclic nucleotide-gated ion channel 13 OS Arabidopsis thaliana GN CNGC13 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SKD7|CNGC3_ARATH 1 705 + 705 Gaps:81 99.15 706 53.86 0.0 Probable cyclic nucleotide-gated ion channel 3 OS Arabidopsis thaliana GN CNGC3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M0A4|CNGC9_ARATH 84 709 + 626 Gaps:56 86.22 733 53.16 0.0 Putative cyclic nucleotide-gated ion channel 9 OS Arabidopsis thaliana GN CNGC9 PE 1 SV 1
blastp_uniprot_sprot sp|O82226|CNGC6_ARATH 84 709 + 626 Gaps:75 86.61 747 51.78 0.0 Probable cyclic nucleotide-gated ion channel 6 OS Arabidopsis thaliana GN CNGC6 PE 1 SV 2
blastp_uniprot_sprot sp|Q8RWS9|CNGC5_ARATH 1 656 + 656 Gaps:60 90.93 717 51.69 0.0 Probable cyclic nucleotide-gated ion channel 5 OS Arabidopsis thaliana GN CNGC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S9N5|CNGC7_ARATH 1 656 + 656 Gaps:72 88.08 738 48.77 0.0 Putative cyclic nucleotide-gated ion channel 7 OS Arabidopsis thaliana GN CNGC7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FXH6|CNGC8_ARATH 84 657 + 574 Gaps:46 75.70 753 52.98 0.0 Putative cyclic nucleotide-gated ion channel 8 OS Arabidopsis thaliana GN CNGC8 PE 3 SV 2
blastp_uniprot_sprot sp|Q9SL29|CNG15_ARATH 84 708 + 625 Gaps:51 90.56 678 50.16 0.0 Putative cyclic nucleotide-gated ion channel 15 OS Arabidopsis thaliana GN CNGC15 PE 3 SV 1

30 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 216 268 53 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 332 610 279 PTHR10217:SF465 none none none
PANTHER 632 675 44 PTHR10217:SF465 none none none
SUPERFAMILY 412 606 195 SSF51206 none none IPR018490
Pfam 508 597 90 PF00027 none Cyclic nucleotide-binding domain IPR000595
Phobius 608 628 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 481 597 117 G3DSA:2.60.120.10 none none IPR014710
Phobius 379 400 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 415 474 60 G3DSA:1.10.287.630 none none none
Phobius 120 192 73 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 45 66 22 Coil none none none
ProSiteProfiles 483 565 83 PS50042 none cAMP/cGMP binding motif profile. IPR000595
Pfam 145 400 256 PF00520 none Ion transport protein IPR005821
Gene3D 345 405 61 G3DSA:1.10.287.70 none none none
Gene3D 98 290 193 G3DSA:1.10.287.70 none none none
Phobius 101 119 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 332 610 279 PTHR10217 none none none
PANTHER 1 295 295 PTHR10217 none none none
PANTHER 1 295 295 PTHR10217:SF465 none none none
ProSiteProfiles 641 667 27 PS50096 none IQ motif profile. IPR000048
Phobius 629 709 81 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 287 378 92 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 483 612 130 SM00100 none Cyclic nucleotide-monophosphate binding domain IPR000595
PANTHER 632 675 44 PTHR10217 none none none
SUPERFAMILY 89 291 203 SSF81324 none none none
SUPERFAMILY 345 405 61 SSF81324 none none none
Phobius 401 607 207 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 100 100 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 269 286 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 193 215 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 264 286 22
TMHMM 375 397 22
TMHMM 101 123 22
TMHMM 193 215 22
TMHMM 138 157 19

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 44   Mitochondrion 4 0.019 0.757 NON-PLANT 44