Protein : Qrob_P0114660.2 Q. robur
Protein Identifier  ? Qrob_P0114660.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0444//KOG0472//KOG0531//KOG0618//KOG4194//KOG4658 - Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]. // Leucine-rich repeat protein [Function unknown]. // Protein phosphatase 1 regulatory subunit and related proteins [Signal transduction mechanisms]. // Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]. // Membrane glycoprotein LIG-1 [Signal transduction mechanisms]. // Apoptotic ATPase [Signal transduction mechanisms]. Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 498  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0821520 1 366 + 366 Gaps:94 85.92 682 51.54 7e-119 Phytosulfokine receptor precursor putative (EC:3.1.3.16 1.3.1.74)
blastp_kegg lcl|tcc:TCM_007422 1 368 + 368 Gaps:118 85.90 695 53.94 6e-116 Phytosulfokin receptor 1 putative
blastp_kegg lcl|tcc:TCM_007424 1 366 + 366 Gaps:66 89.13 681 48.93 4e-114 Phytosulfokin receptor 1 putative
blastp_kegg lcl|pop:POPTR_0001s31820g 2 366 + 365 Gaps:43 88.02 676 44.20 9e-111 POPTRDRAFT_549858 hypothetical protein
blastp_kegg lcl|pxb:103943170 2 370 + 369 Gaps:60 56.81 1021 46.21 5e-110 phytosulfokine receptor 1
blastp_kegg lcl|mdm:103403435 1 370 + 370 Gaps:79 54.55 1021 47.40 3e-109 phytosulfokine receptor 1
blastp_kegg lcl|rcu:RCOM_0814300 1 367 + 367 Gaps:47 59.60 1010 45.68 6e-109 Phytosulfokine receptor precursor putative (EC:2.7.12.2 1.3.1.74)
blastp_kegg lcl|fve:101296096 1 362 + 362 Gaps:57 85.57 700 44.91 2e-108 phytosulfokine receptor 1-like
blastp_kegg lcl|fve:101293485 2 369 + 368 Gaps:61 89.34 797 45.22 5e-108 phytosulfokine receptor 1-like
blastp_kegg lcl|pop:POPTR_0017s07750g 1 368 + 368 Gaps:164 88.62 668 53.89 2e-107 POPTRDRAFT_909346 hypothetical protein
blastp_pdb 3rj0_A 2 351 + 350 Gaps:232 87.82 772 41.45 3e-36 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 2 351 + 350 Gaps:232 87.82 772 41.45 3e-36 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgz_A 2 329 + 328 Gaps:230 85.16 768 42.05 2e-35 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 2 329 + 328 Gaps:230 85.16 768 42.05 2e-35 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 96 328 + 233 Gaps:30 76.36 313 30.13 1e-18 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_uniprot_sprot sp|Q8LPB4|PSKR1_DAUCA 1 359 + 359 Gaps:141 58.28 1021 50.25 2e-100 Phytosulfokine receptor 1 OS Daucus carota GN PSKR PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVR7|PSKR1_ARATH 2 359 + 358 Gaps:88 60.42 1008 46.63 2e-98 Phytosulfokine receptor 1 OS Arabidopsis thaliana GN PSKR1 PE 2 SV 4
blastp_uniprot_sprot sp|Q9FN37|PSKR2_ARATH 1 372 + 372 Gaps:136 60.62 1036 47.93 2e-77 Phytosulfokine receptor 2 OS Arabidopsis thaliana GN PSKR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SHI3|RLP2_ARATH 1 370 + 370 Gaps:128 87.93 729 46.02 1e-61 Receptor-like protein 2 OS Arabidopsis thaliana GN RLP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7S5|PSYR1_ARATH 2 332 + 331 Gaps:163 55.62 1095 44.50 2e-53 Tyrosine-sulfated glycopeptide receptor 1 OS Arabidopsis thaliana GN PSYR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LJF3|BRL3_ARATH 2 366 + 365 Gaps:189 54.90 1164 39.12 7e-37 Receptor-like protein kinase BRI1-like 3 OS Arabidopsis thaliana GN BRL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZWC8|BRL1_ARATH 2 366 + 365 Gaps:213 61.15 1166 40.25 6e-36 Serine/threonine-protein kinase BRI1-like 1 OS Arabidopsis thaliana GN BRL1 PE 1 SV 1
blastp_uniprot_sprot sp|O22476|BRI1_ARATH 2 361 + 360 Gaps:268 59.20 1196 40.54 3e-35 Protein BRASSINOSTEROID INSENSITIVE 1 OS Arabidopsis thaliana GN BRI1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GUQ5|BRI1_SOLLC 2 330 + 329 Gaps:163 43.99 1207 44.44 1e-32 Brassinosteroid LRR receptor kinase OS Solanum lycopersicum GN CURL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L899|BRI1_SOLPE 2 330 + 329 Gaps:185 43.99 1207 44.07 1e-32 Systemin receptor SR160 OS Solanum peruvianum PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 2 303 + 302 Gaps:204 52.48 968 49.80 1e-34 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_cdd gnl|CDD|178695 2 321 + 320 Gaps:41 17.66 623 62.73 2e-11 PLN03150 PLN03150 hypothetical protein Provisional.
rpsblast_cdd gnl|CDD|202252 362 449 + 88 Gaps:8 38.02 242 34.78 9e-11 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.
rpsblast_kog gnl|CDD|39396 2 294 + 293 Gaps:108 43.07 873 37.50 2e-14 KOG4194 KOG4194 KOG4194 Membrane glycoprotein LIG-1 [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35838 2 297 + 296 Gaps:193 45.98 1081 41.45 2e-14 KOG0618 KOG0618 KOG0618 Serine/threonine phosphatase 2C containing leucine-rich repeats similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms].

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 456 497 42 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 368 434 67 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 2 180 179 G3DSA:3.80.10.10 none none none
Pfam 237 258 22 PF00560 none Leucine Rich Repeat IPR001611
Pfam 46 67 22 PF00560 none Leucine Rich Repeat IPR001611
PANTHER 215 367 153 PTHR24420:SF652 none none none
Pfam 106 165 60 PF13855 none Leucine rich repeat IPR001611
Phobius 1 343 343 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 216 321 106 G3DSA:3.80.10.10 none none none
SUPERFAMILY 217 317 101 SSF52058 none none none
SUPERFAMILY 2 181 180 SSF52058 none none none
PANTHER 215 367 153 PTHR24420 none none none
PANTHER 1 179 179 PTHR24420 none none none
PANTHER 1 179 179 PTHR24420:SF652 none none none
Pfam 362 449 88 PF02485 none Core-2/I-Branching enzyme IPR003406
Phobius 435 455 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 344 367 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 345 367 22
TMHMM 435 457 22

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting