Protein : Qrob_P0112660.2 Q. robur
Protein Identifier  ? Qrob_P0112660.2 Organism . Name  Quercus robur
Score  90.5 Score Type  egn
Protein Description  (M=2) K11971 - E3 ubiquitin-protein ligase RNF14 [EC:6.3.2.19] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 321  
Kegg Orthology  K11971
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103336863 44 289 + 246 none 40.59 606 71.14 2e-120 E3 ubiquitin-protein ligase RNF14
blastp_kegg lcl|vvi:100262589 3 303 + 301 Gaps:3 35.02 868 64.47 2e-119 uncharacterized LOC100262589
blastp_kegg lcl|pxb:103960442 3 286 + 284 Gaps:20 43.66 678 65.20 2e-117 E3 ubiquitin-protein ligase RNF14
blastp_kegg lcl|fve:101305848 3 286 + 284 Gaps:12 42.86 672 66.32 2e-116 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|pop:POPTR_0001s02180g 16 283 + 268 Gaps:4 42.37 642 65.07 4e-113 zinc finger family protein
blastp_kegg lcl|tcc:TCM_016558 3 286 + 284 Gaps:10 43.07 678 61.99 6e-111 NDR1/HIN1-like 8 isoform 2
blastp_kegg lcl|cic:CICLE_v10011251mg 3 289 + 287 Gaps:11 42.14 655 61.59 3e-109 hypothetical protein
blastp_kegg lcl|cit:102606785 3 289 + 287 Gaps:11 42.14 655 60.87 2e-107 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|sot:102592226 31 286 + 256 none 35.75 716 61.33 3e-104 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|pper:PRUPE_ppa004830mg 92 289 + 198 none 40.41 490 74.24 3e-104 hypothetical protein
blastp_uniprot_sprot sp|Q9JI90|RNF14_MOUSE 85 300 + 216 Gaps:42 47.84 485 31.47 6e-17 E3 ubiquitin-protein ligase RNF14 OS Mus musculus GN Rnf14 PE 2 SV 2
blastp_uniprot_sprot sp|Q9UBS8|RNF14_HUMAN 85 300 + 216 Gaps:41 48.73 474 29.44 3e-14 E3 ubiquitin-protein ligase RNF14 OS Homo sapiens GN RNF14 PE 1 SV 1
blastp_uniprot_sprot sp|Q5M8G6|IMPTA_XENTR 81 220 + 140 Gaps:33 33.65 318 32.71 2e-07 Protein IMPACT-A OS Xenopus tropicalis GN impact-A PE 2 SV 1
blastp_uniprot_sprot sp|Q5GFD9|IMPCT_RAT 81 213 + 133 Gaps:33 31.55 317 33.00 2e-07 Protein IMPACT OS Rattus norvegicus GN Impact PE 2 SV 1
blastp_uniprot_sprot sp|O55091|IMPCT_MOUSE 81 213 + 133 Gaps:33 31.45 318 31.00 4e-07 Protein IMPACT OS Mus musculus GN Impact PE 1 SV 2
blastp_uniprot_sprot sp|A9UMG5|IMPTB_XENTR 158 218 + 61 none 19.24 317 34.43 5e-06 Protein IMPACT-B OS Xenopus tropicalis GN impact-B PE 2 SV 1
blastp_uniprot_sprot sp|Q642J4|IMPCT_DANRE 158 218 + 61 none 19.24 317 34.43 5e-06 Protein IMPACT OS Danio rerio GN impact PE 2 SV 1
rpsblast_cdd gnl|CDD|203327 81 219 + 139 Gaps:29 99.12 113 29.46 3e-16 pfam05773 RWD RWD domain. This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The function of this domain is unknown. GCN2 is the alpha-subunit of the only translation initiation factor (eIF2 alpha) kinase that appears in all eukaryotes. Its function requires an interaction with GCN1 via the domain at its N-terminus which is termed the RWD domain after three major RWD-containing proteins: RING finger-containing proteins WD-repeat-containing proteins and yeast DEAD (DEXD)-like helicases. The structure forms an alpha + beta sandwich fold consisting of two layers: a four-stranded antiparallel beta-sheet and three side-by-side alpha-helices.
rpsblast_cdd gnl|CDD|128858 88 222 + 135 Gaps:28 100.00 107 27.10 1e-15 smart00591 RWD domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain.
rpsblast_kog gnl|CDD|37025 77 286 + 210 Gaps:14 44.04 445 32.14 2e-36 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 286 278 PTHR11685:SF121 none none none
Coils 20 50 31 Coil none none none
PANTHER 9 286 278 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127
SMART 87 222 136 SM00591 none none IPR006575
SUPERFAMILY 81 129 49 SSF54495 none none IPR016135
SUPERFAMILY 158 218 61 SSF54495 none none IPR016135
ProSiteProfiles 87 222 136 PS50908 none RWD domain profile. IPR006575
Gene3D 76 218 143 G3DSA:3.10.110.10 none none IPR016135
Pfam 82 218 137 PF05773 none RWD domain IPR006575

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting