Protein : Qrob_P0112650.2 Q. robur
Protein Identifier  ? Qrob_P0112650.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=2) K11971 - E3 ubiquitin-protein ligase RNF14 [EC:6.3.2.19] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 348  
Kegg Orthology  K11971
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102606785 54 347 + 294 Gaps:1 45.04 655 80.00 1e-178 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|cic:CICLE_v10011251mg 50 347 + 298 Gaps:1 45.65 655 78.93 3e-178 hypothetical protein
blastp_kegg lcl|tcc:TCM_016558 55 347 + 293 Gaps:1 43.36 678 81.29 8e-176 NDR1/HIN1-like 8 isoform 2
blastp_kegg lcl|pper:PRUPE_ppa004830mg 54 347 + 294 Gaps:1 60.20 490 78.64 2e-174 hypothetical protein
blastp_kegg lcl|pmum:103336863 54 347 + 294 Gaps:1 48.68 606 78.31 4e-172 E3 ubiquitin-protein ligase RNF14
blastp_kegg lcl|mdm:103409492 54 347 + 294 Gaps:1 59.48 496 78.31 2e-171 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|pxb:103960442 54 347 + 294 Gaps:1 43.51 678 77.97 1e-170 E3 ubiquitin-protein ligase RNF14
blastp_kegg lcl|csv:101211646 54 347 + 294 Gaps:1 46.24 638 75.25 5e-168 E3 ubiquitin-protein ligase RNF14-like
blastp_kegg lcl|cmo:103503565 54 347 + 294 Gaps:1 46.02 641 75.25 2e-167 E3 ubiquitin-protein ligase RNF14
blastp_kegg lcl|sot:102592226 55 346 + 292 Gaps:1 40.92 716 75.43 6e-165 E3 ubiquitin-protein ligase RNF14-like
blastp_uniprot_sprot sp|Q9UBS8|RNF14_HUMAN 59 258 + 200 Gaps:13 44.94 474 35.21 4e-31 E3 ubiquitin-protein ligase RNF14 OS Homo sapiens GN RNF14 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JI90|RNF14_MOUSE 59 264 + 206 Gaps:13 45.15 485 34.25 5e-31 E3 ubiquitin-protein ligase RNF14 OS Mus musculus GN Rnf14 PE 2 SV 2
blastp_uniprot_sprot sp|Q04638|ITT1_YEAST 57 259 + 203 Gaps:56 54.96 464 27.84 5e-19 Translation termination inhibitor protein ITT1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ITT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9US46|ITT1_SCHPO 61 258 + 198 Gaps:24 50.57 435 29.09 1e-18 E3 ubiquitin-protein ligase itt1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN itt1 PE 4 SV 1
blastp_uniprot_sprot sp|Q925F3|R144A_MOUSE 61 261 + 201 Gaps:30 66.78 292 30.77 3e-16 Probable E3 ubiquitin-protein ligase RNF144A OS Mus musculus GN Rnf144a PE 1 SV 1
blastp_uniprot_sprot sp|P50876|R144A_HUMAN 61 261 + 201 Gaps:30 66.78 292 30.26 1e-15 Probable E3 ubiquitin-protein ligase RNF144A OS Homo sapiens GN RNF144A PE 1 SV 2
blastp_uniprot_sprot sp|Q6DH94|R1442_DANRE 61 261 + 201 Gaps:33 66.89 293 30.61 2e-15 Probable E3 ubiquitin-protein ligase RNF144A-B OS Danio rerio GN rnf144ab PE 2 SV 1
blastp_uniprot_sprot sp|A4IIY1|R144A_XENTR 61 261 + 201 Gaps:30 66.78 292 29.74 3e-15 Probable E3 ubiquitin-protein ligase RNF144A OS Xenopus tropicalis GN rnf144a PE 2 SV 1
blastp_uniprot_sprot sp|Q5RFV4|R1441_DANRE 61 261 + 201 Gaps:29 66.89 293 29.08 3e-14 Probable E3 ubiquitin-protein ligase RNF144A-A OS Danio rerio GN rnf144aa PE 3 SV 1
blastp_uniprot_sprot sp|Q7Z419|R144B_HUMAN 61 261 + 201 Gaps:32 63.70 303 26.94 7e-14 E3 ubiquitin-protein ligase RNF144B OS Homo sapiens GN RNF144B PE 1 SV 1
rpsblast_kog gnl|CDD|37025 56 317 + 262 Gaps:42 55.28 445 39.84 9e-58 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37023 61 246 + 186 Gaps:32 44.27 384 30.00 1e-13 KOG1812 KOG1812 KOG1812 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37026 45 246 + 202 Gaps:26 42.34 444 29.79 6e-13 KOG1815 KOG1815 KOG1815 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35230 46 246 + 201 Gaps:31 47.53 446 25.00 3e-09 KOG0006 KOG0006 KOG0006 E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification protein turnover chaperones].

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 54 78 25 G3DSA:3.30.40.10 none none IPR013083
Gene3D 130 142 13 G3DSA:3.30.40.10 none none IPR013083
SMART 50 91 42 SM00184 none Ring finger IPR001841
SMART 296 325 30 SM00184 none Ring finger IPR001841
SMART 217 246 30 SM00184 none Ring finger IPR001841
SUPERFAMILY 112 173 62 SSF57850 none none none
PANTHER 56 272 217 PTHR11685:SF121 none none none
Gene3D 214 251 38 G3DSA:3.30.40.10 none none IPR013083
Gene3D 290 301 12 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 204 256 53 SSF57850 none none none
ProSitePatterns 61 70 10 PS00518 none Zinc finger RING-type signature. IPR017907
Pfam 210 249 40 PF01485 none IBR domain IPR002867
Pfam 112 170 59 PF01485 none IBR domain IPR002867
PANTHER 56 272 217 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127
SUPERFAMILY 54 126 73 SSF57850 none none none
SMART 199 261 63 SM00647 none In Between Ring fingers IPR002867
SMART 112 170 59 SM00647 none In Between Ring fingers IPR002867
SUPERFAMILY 287 343 57 SSF57850 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting