Protein : Qrob_P0112580.2 Q. robur
Protein Identifier  ? Qrob_P0112580.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=10) K09419 - heat shock transcription factor, other eukaryote Gene Prediction Quality  validated
Protein length 

Sequence

Length: 431  
Kegg Orthology  K09419
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0009408 response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016563 3 430 + 428 Gaps:7 80.49 528 71.76 0.0 Heat shock transcription factor A1D isoform 1
blastp_kegg lcl|pop:POPTR_0001s02140g 3 430 + 428 Gaps:19 81.37 510 71.57 0.0 heat shock transcription factor family protein
blastp_kegg lcl|pop:POPTR_0003s09370g 3 428 + 426 Gaps:19 81.07 507 71.29 0.0 POPTRDRAFT_757199 heat shock transcription factor family protein
blastp_kegg lcl|gmx:732544 3 430 + 428 Gaps:13 82.55 510 67.46 0.0 heat shock factor protein hsf8-related
blastp_kegg lcl|vvi:100243710 3 430 + 428 Gaps:31 81.25 496 70.97 0.0 heat shock factor protein HSF8-like
blastp_kegg lcl|cic:CICLE_v10015269mg 2 430 + 429 Gaps:16 95.23 440 66.83 0.0 hypothetical protein
blastp_kegg lcl|cit:102625086 3 430 + 428 Gaps:16 81.01 516 66.75 0.0 heat shock factor protein HSF8-like
blastp_kegg lcl|cit:102624630 3 430 + 428 Gaps:16 81.01 516 66.75 0.0 heat shock factor protein HSF8-like
blastp_kegg lcl|cit:102624148 3 430 + 428 Gaps:16 81.01 516 66.75 0.0 heat shock factor protein HSF8-like
blastp_kegg lcl|pvu:PHAVU_003G283300g 3 429 + 427 Gaps:46 81.65 474 72.09 5e-180 hypothetical protein
blastp_uniprot_sprot sp|Q40152|HSF8_SOLLC 3 421 + 419 Gaps:45 79.32 527 56.22 2e-134 Heat shock factor protein HSF8 OS Solanum lycopersicum GN HSF8 PE 3 SV 1
blastp_uniprot_sprot sp|P41153|HSF8_SOLPE 3 421 + 419 Gaps:47 78.94 527 57.45 7e-130 Heat shock factor protein HSF8 OS Solanum peruvianum GN HSF8 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQM7|HFA1D_ARATH 3 427 + 425 Gaps:60 78.56 485 54.59 3e-115 Heat stress transcription factor A-1d OS Arabidopsis thaliana GN HSFA1D PE 2 SV 2
blastp_uniprot_sprot sp|Q84T61|HSFA1_ORYSJ 3 425 + 423 Gaps:33 80.24 506 52.22 1e-108 Heat stress transcription factor A-1 OS Oryza sativa subsp. japonica GN HSFA1 PE 2 SV 1
blastp_uniprot_sprot sp|P41151|HFA1A_ARATH 3 429 + 427 Gaps:77 77.58 495 50.78 1e-99 Heat stress transcription factor A-1a OS Arabidopsis thaliana GN HSFA1A PE 1 SV 2
blastp_uniprot_sprot sp|O81821|HFA1B_ARATH 3 429 + 427 Gaps:73 81.91 481 50.00 4e-84 Heat stress transcription factor A-1b OS Arabidopsis thaliana GN HSFA1B PE 2 SV 2
blastp_uniprot_sprot sp|Q9SCW5|HFA1E_ARATH 3 209 + 207 Gaps:6 44.23 468 65.70 9e-75 Heat stress transcription factor A-1e OS Arabidopsis thaliana GN HSFA1E PE 2 SV 2
blastp_uniprot_sprot sp|P41152|HSF30_SOLPE 3 218 + 216 Gaps:28 58.12 351 49.51 2e-46 Heat shock factor protein HSF30 OS Solanum peruvianum GN HSF30 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VBB2|HFA2B_ORYSJ 3 166 + 164 Gaps:12 41.94 372 57.05 5e-45 Heat stress transcription factor A-2b OS Oryza sativa subsp. japonica GN HSFA2B PE 2 SV 1
blastp_uniprot_sprot sp|Q6F388|HFA2E_ORYSJ 3 176 + 174 Gaps:14 47.06 357 51.19 4e-44 Heat stress transcription factor A-2e OS Oryza sativa subsp. japonica GN HSFA2E PE 2 SV 1
rpsblast_cdd gnl|CDD|201233 1 36 + 36 Gaps:2 39.58 96 57.89 3e-09 pfam00447 HSF_DNA-bind HSF-type DNA-binding.
rpsblast_cdd gnl|CDD|197712 1 33 + 33 Gaps:11 41.90 105 50.00 6e-08 smart00415 HSF heat shock factor.
rpsblast_kog gnl|CDD|35846 1 204 + 204 Gaps:4 67.76 304 31.07 8e-29 KOG0627 KOG0627 KOG0627 Heat shock transcription factor [Transcription].

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 4 33 30 G3DSA:1.10.10.10 none none IPR011991
PANTHER 8 234 227 PTHR10015 none none IPR027725
PANTHER 268 389 122 PTHR10015 none none IPR027725
Coils 62 90 29 Coil none none none
PANTHER 268 389 122 PTHR10015:SF137 none none IPR027709
PANTHER 8 234 227 PTHR10015:SF137 none none IPR027709

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting