Protein : Qrob_P0112500.2 Q. robur
Protein Identifier  ? Qrob_P0112500.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=55) PF00646//PF07734 - F-box domain // F-box associated Gene Prediction Quality  validated
Protein length 

Sequence

Length: 374  
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103407377 1 369 + 369 Gaps:42 93.92 378 39.72 5e-62 F-box protein CPR30-like
blastp_kegg lcl|pxb:103946108 1 369 + 369 Gaps:42 93.92 378 39.15 1e-59 F-box protein CPR30-like
blastp_kegg lcl|fve:101294144 1 372 + 372 Gaps:30 87.65 413 37.57 3e-58 F-box protein CPR30-like
blastp_kegg lcl|tcc:TCM_030369 1 360 + 360 Gaps:42 78.07 415 39.20 1e-57 F-box family protein putative
blastp_kegg lcl|rcu:RCOM_0401550 1 371 + 371 Gaps:30 88.69 389 37.10 5e-57 ubiquitin-protein ligase putative
blastp_kegg lcl|pmum:103326983 1 369 + 369 Gaps:32 84.48 406 35.86 3e-56 F-box protein CPR30-like
blastp_kegg lcl|mdm:103426954 1 369 + 369 Gaps:39 93.96 381 37.71 4e-56 F-box protein CPR30-like
blastp_kegg lcl|pper:PRUPE_ppa006542mg 1 372 + 372 Gaps:32 85.22 406 35.55 1e-55 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa020328mg 1 370 + 370 Gaps:39 95.32 385 37.33 9e-55 hypothetical protein
blastp_kegg lcl|mdm:103446783 1 369 + 369 Gaps:30 83.86 409 32.65 1e-52 F-box protein CPR30
blastp_uniprot_sprot sp|Q9SU30|CPR30_ARATH 1 369 + 369 Gaps:43 86.68 413 31.01 4e-46 F-box protein CPR30 OS Arabidopsis thaliana GN CPR30 PE 1 SV 2
blastp_uniprot_sprot sp|Q8GXC7|FBK50_ARATH 4 362 + 359 Gaps:75 85.25 427 31.04 2e-32 F-box/kelch-repeat protein At3g06240 OS Arabidopsis thaliana GN At3g06240 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUY0|FB244_ARATH 1 363 + 363 Gaps:44 86.82 402 27.22 3e-31 F-box protein At4g22390 OS Arabidopsis thaliana GN At4g22390 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SJ06|FB115_ARATH 3 365 + 363 Gaps:34 86.62 396 26.82 3e-19 F-box protein At2g21930 OS Arabidopsis thaliana GN At2g21930 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUP1|FBK61_ARATH 2 295 + 294 Gaps:54 71.39 381 29.78 4e-19 Putative F-box/kelch-repeat protein At3g17570 OS Arabidopsis thaliana GN At3g17570 PE 4 SV 1
blastp_uniprot_sprot sp|Q9CAE7|FB138_ARATH 2 317 + 316 Gaps:70 77.30 370 30.77 6e-19 Putative F-box protein At3g10430 OS Arabidopsis thaliana GN At3g10430 PE 4 SV 1
blastp_uniprot_sprot sp|Q9LIR8|FBK67_ARATH 3 356 + 354 Gaps:52 89.01 364 31.48 3e-18 F-box/kelch-repeat protein At3g23880 OS Arabidopsis thaliana GN At3g23880 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LUJ6|FB176_ARATH 2 317 + 316 Gaps:50 76.76 383 28.23 2e-17 Putative F-box protein At3g22650 OS Arabidopsis thaliana GN At3g22650 PE 4 SV 1
blastp_uniprot_sprot sp|Q9T0J4|FB249_ARATH 4 259 + 256 Gaps:36 56.81 426 30.99 4e-17 Putative F-box protein At4g38870 OS Arabidopsis thaliana GN At4g38870 PE 4 SV 1
blastp_uniprot_sprot sp|Q9SSQ2|FB55_ARATH 3 308 + 306 Gaps:63 67.85 423 33.45 1e-16 F-box protein At1g52490 OS Arabidopsis thaliana GN At1g52490 PE 4 SV 1
rpsblast_cdd gnl|CDD|162458 103 355 + 253 Gaps:37 99.13 230 25.88 2e-20 TIGR01640 F_box_assoc_1 F-box protein interaction domain. This model describes a large family of plant domains with several hundred members in Arabidopsis thaliana. Most examples are found C-terminal to an F-box (pfam00646) a 60 amino acid motif involved in ubiquitination of target proteins to mark them for degradation. Two-hybid experiments support the idea that most members are interchangeable F-box subunits of SCF E3 complexes. Some members have two copies of this domain.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 1 43 43 PS50181 none F-box domain profile. IPR001810
Gene3D 1 40 40 G3DSA:1.20.1280.50 none none none
SUPERFAMILY 1 75 75 SSF81383 none none IPR001810
Pfam 2 41 40 PF00646 none F-box domain IPR001810
PANTHER 1 369 369 PTHR31790 none none none
Pfam 215 353 139 PF07734 none F-box associated IPR006527
SMART 4 44 41 SM00256 none A Receptor for Ubiquitination Targets IPR001810
TIGRFAM 103 355 253 TIGR01640 none F_box_assoc_1: F-box protein interaction domain IPR017451

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting