Protein : Qrob_P0112410.2 Q. robur
Protein Identifier  ? Qrob_P0112410.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR22990 - F-BOX ONLY PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 335  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100778591 12 321 + 310 Gaps:51 85.49 324 76.90 1e-142 F-box protein SKIP31-like
blastp_kegg lcl|pper:PRUPE_ppa008708mg 9 321 + 313 Gaps:47 86.34 322 75.18 4e-140 hypothetical protein
blastp_kegg lcl|pmum:103321139 12 321 + 310 Gaps:47 85.40 322 76.00 6e-140 F-box protein SKIP31
blastp_kegg lcl|cam:101489371 12 321 + 310 Gaps:53 85.58 326 72.04 1e-135 F-box protein SKIP31-like
blastp_kegg lcl|gmx:100796362 12 321 + 310 Gaps:52 85.54 325 74.82 1e-134 F-box protein SKIP31-like
blastp_kegg lcl|pvu:PHAVU_002G121600g 12 321 + 310 Gaps:47 85.49 324 72.20 7e-134 hypothetical protein
blastp_kegg lcl|csv:101229783 9 321 + 313 Gaps:47 86.88 320 72.30 1e-133 F-box protein SKIP31-like
blastp_kegg lcl|csv:101203483 9 321 + 313 Gaps:47 86.88 320 72.30 2e-133 F-box protein SKIP31-like
blastp_kegg lcl|cmo:103487620 9 321 + 313 Gaps:47 86.34 322 71.94 4e-133 F-box protein SKIP31
blastp_kegg lcl|mtr:MTR_5g025560 12 321 + 310 Gaps:53 86.11 324 70.97 8e-131 F-box protein SKIP31
blastp_uniprot_sprot sp|Q9FHK0|SKI31_ARATH 10 320 + 311 Gaps:54 85.76 316 63.47 5e-110 F-box protein SKIP31 OS Arabidopsis thaliana GN SKIP31 PE 1 SV 1
rpsblast_cdd gnl|CDD|205155 78 123 + 46 none 97.87 47 41.30 4e-10 pfam12937 F-box-like F-box-like. This is an F-box-like family.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 12 192 181 PTHR22990 none none none
PANTHER 238 316 79 PTHR22990 none none none
SUPERFAMILY 64 147 84 SSF81383 none none IPR001810
Gene3D 78 149 72 G3DSA:1.20.1280.50 none none none
Pfam 79 123 45 PF12937 none F-box-like IPR001810
SMART 81 121 41 SM00256 none A Receptor for Ubiquitination Targets IPR001810
ProSiteProfiles 75 121 47 PS50181 none F-box domain profile. IPR001810

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting