Protein : Qrob_P0112340.2 Q. robur
Protein Identifier  ? Qrob_P0112340.2 Organism . Name  Quercus robur
Score  88.4 Score Type  egn
Protein Description  (M=2) K06066 - CBF1 interacting corepressor Gene Prediction Quality  validated
Protein length 

Sequence

Length: 202  
Kegg Orthology  K06066
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Protein Sequence Displayer

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0 Synonyms

0 GO Terms

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103487621 1 189 + 189 Gaps:29 31.92 589 78.19 9e-84 uncharacterized zinc finger CCHC domain-containing protein At4g19190
blastp_kegg lcl|csv:101220048 1 189 + 189 Gaps:29 31.86 590 78.19 3e-83 uncharacterized LOC101220048
blastp_kegg lcl|vvi:100242608 1 189 + 189 Gaps:23 34.91 527 78.26 6e-83 uncharacterized LOC100242608
blastp_kegg lcl|cam:101511103 1 190 + 190 Gaps:19 30.40 602 75.96 4e-82 uncharacterized LOC101511103
blastp_kegg lcl|rcu:RCOM_0867880 1 189 + 189 Gaps:26 35.38 506 79.89 5e-82 cir putative
blastp_kegg lcl|tcc:TCM_016691 9 195 + 187 Gaps:28 30.14 627 76.19 9e-82 Zinc knuckle family protein isoform 1
blastp_kegg lcl|pvu:PHAVU_002G121300g 1 189 + 189 Gaps:25 28.44 640 77.47 6e-81 hypothetical protein
blastp_kegg lcl|mtr:MTR_2g040410 1 190 + 190 Gaps:18 20.02 909 75.82 5e-80 Zinc finger CCHC domain-containing protein putative
blastp_kegg lcl|pper:PRUPE_ppa003979mg 1 189 + 189 Gaps:25 30.54 537 81.71 1e-79 hypothetical protein
blastp_kegg lcl|fve:101296830 1 189 + 189 Gaps:22 30.78 575 79.10 2e-79 uncharacterized zinc finger CCHC domain-containing protein At4g19190-like
blastp_uniprot_sprot sp|Q8VZ67|Y4919_ARATH 2 189 + 188 Gaps:31 31.76 595 72.49 6e-76 Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS Arabidopsis thaliana GN At4g19190 PE 2 SV 1
rpsblast_kog gnl|CDD|38998 29 188 + 160 Gaps:50 24.28 453 33.64 2e-16 KOG3794 KOG3794 KOG3794 CBF1-interacting corepressor CIR and related proteins [Transcription].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 41 77 37 SM01083 none N-terminal domain of CBF1 interacting co-repressor CIR IPR019339
Pfam 42 73 32 PF10197 none N-terminal domain of CBF1 interacting co-repressor CIR IPR019339

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting