Protein : Qrob_P0112250.2 Q. robur
Protein Identifier  ? Qrob_P0112250.2 Organism . Name  Quercus robur
Protein Description  (M=1) 1.14.99.42 - Zeaxanthin 7,8-dioxygenase. Alias (in v1)  Qrob_P0714860.1
Code Enzyme  EC:1.14.99.42 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 606  
Kegg Orthology  K09840
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Sequence Feature Displayer

Protein Sequence Displayer

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0 Synonyms

0 GO Terms

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103321735 1 605 + 605 Gaps:10 100.00 597 74.37 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic
blastp_kegg lcl|pop:POPTR_0019s12320g 1 605 + 605 Gaps:27 100.00 612 74.51 0.0 POPTRDRAFT_913328 hypothetical protein
blastp_kegg lcl|tcc:TCM_016684 1 605 + 605 Gaps:21 82.34 736 74.26 0.0 Nine-cis-epoxycarotenoid dioxygenase 4
blastp_kegg lcl|rcu:RCOM_0867890 1 605 + 605 Gaps:21 98.71 618 74.59 0.0 9-cis-epoxycarotenoid dioxygenase putative
blastp_kegg lcl|cic:CICLE_v10031003mg 29 605 + 577 Gaps:17 94.86 603 75.17 0.0 hypothetical protein
blastp_kegg lcl|cit:102612995 29 605 + 577 Gaps:17 86.40 662 75.00 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic-like
blastp_kegg lcl|mdm:103403002 1 605 + 605 Gaps:10 100.00 597 72.70 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic
blastp_kegg lcl|vvi:100251100 21 605 + 585 Gaps:14 96.99 599 73.32 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic-like
blastp_kegg lcl|cam:101511615 83 604 + 522 Gaps:8 89.24 576 77.04 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic-like
blastp_kegg lcl|cmo:103493037 1 605 + 605 Gaps:19 100.00 592 71.11 0.0 probable carotenoid cleavage dioxygenase 4 chloroplastic
blastp_pdb 3npe_A 103 603 + 501 Gaps:19 94.14 529 42.57 2e-122 mol:protein length:529 9-cis-epoxycarotenoid dioxygenase 1 chloropl
blastp_pdb 2bix_B 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_pdb 2bix_A 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_pdb 2biw_D 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_pdb 2biw_C 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_pdb 2biw_B 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_pdb 2biw_A 141 594 + 454 Gaps:72 91.43 490 30.13 7e-37 mol:protein length:490 APOCAROTENOID-CLEAVING OXYGENASE
blastp_uniprot_sprot sp|O49675|CCD4_ARATH 70 605 + 536 Gaps:7 90.59 595 72.73 0.0 Probable carotenoid cleavage dioxygenase 4 chloroplastic OS Arabidopsis thaliana GN CCD4 PE 1 SV 1
blastp_uniprot_sprot sp|Q84K96|ZCD_CROSA 238 602 + 365 Gaps:5 98.64 369 56.87 3e-140 Zeaxanthin 7 8(7' 8')-cleavage dioxygenase chromoplast OS Crocus sativus GN ZCD PE 1 SV 1
blastp_uniprot_sprot sp|O65572|CCD1_ARATH 88 604 + 517 Gaps:34 96.84 538 42.03 3e-125 Carotenoid 9 10(9' 10')-cleavage dioxygenase 1 OS Arabidopsis thaliana GN CCD1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9C6Z1|NCED5_ARATH 111 602 + 492 Gaps:22 82.17 589 42.36 4e-124 Probable 9-cis-epoxycarotenoid dioxygenase NCED5 chloroplastic OS Arabidopsis thaliana GN NCED5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LRR7|NCED3_ARATH 111 604 + 494 Gaps:23 80.97 599 42.06 3e-122 9-cis-epoxycarotenoid dioxygenase NCED3 chloroplastic OS Arabidopsis thaliana GN NCED3 PE 2 SV 1
blastp_uniprot_sprot sp|O24592|NCED1_MAIZE 103 603 + 501 Gaps:19 82.45 604 42.57 2e-121 9-cis-epoxycarotenoid dioxygenase 1 chloroplastic OS Zea mays GN VP14 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LP17|CCD1_PEA 87 604 + 518 Gaps:21 97.04 541 40.76 4e-121 Carotenoid 9 10(9' 10')-cleavage dioxygenase 1 OS Pisum sativum GN CCD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9F5|NCED9_ARATH 63 604 + 542 Gaps:50 78.84 657 42.08 2e-120 9-cis-epoxycarotenoid dioxygenase NCED9 chloroplastic OS Arabidopsis thaliana GN NCED9 PE 2 SV 1
blastp_uniprot_sprot sp|Q84KG5|CCD_CROSA 118 603 + 486 Gaps:21 90.29 546 41.78 1e-119 Carotenoid 9 10(9' 10')-cleavage dioxygenase OS Crocus sativus GN CCD PE 1 SV 1
blastp_uniprot_sprot sp|Q9M6E8|NCED1_PHAVU 111 604 + 494 Gaps:23 78.54 615 40.99 2e-119 9-cis-epoxycarotenoid dioxygenase NCED1 chloroplastic OS Phaseolus vulgaris GN NCED1 PE 2 SV 1
rpsblast_cdd gnl|CDD|177900 1 604 + 604 Gaps:54 97.97 590 43.08 1e-142 PLN02258 PLN02258 9-cis-epoxycarotenoid dioxygenase NCED.
rpsblast_cdd gnl|CDD|202519 125 597 + 473 Gaps:46 100.00 469 41.36 1e-139 pfam03055 RPE65 Retinal pigment epithelial membrane protein. This family represents a retinal pigment epithelial membrane receptor which is abundantly expressed in retinal pigment epithelium and binds plasma retinal binding protein. The family also includes the sequence related neoxanthin cleavage enzyme in plants and lignostilbene-alpha beta-dioxygenase in bacteria.
rpsblast_cdd gnl|CDD|178109 118 604 + 487 Gaps:21 90.64 545 42.11 1e-110 PLN02491 PLN02491 carotenoid 9 10(9' 10')-cleavage dioxygenase.

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 124 598 475 PF03055 none Retinal pigment epithelial membrane protein IPR004294
PANTHER 84 604 521 PTHR10543:SF30 none none none
PANTHER 84 604 521 PTHR10543 none none IPR004294

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting