Protein : Qrob_P0109780.2 Q. robur
Protein Identifier  ? Qrob_P0109780.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR24072:SF127 - RAC-LIKE GTP-BINDING PROTEIN ARAC7 (PTHR24072:SF127) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 219  
Kegg Orthology  K04392
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100266265 1 201 + 201 none 95.71 210 96.52 6e-141 rac-like GTP-binding protein ARAC7
blastp_kegg lcl|pvu:PHAVU_004G166000g 1 201 + 201 none 95.71 210 96.02 4e-140 hypothetical protein
blastp_kegg lcl|cam:101502829 1 201 + 201 none 95.71 210 95.52 2e-139 rac-like GTP-binding protein ARAC7-like
blastp_kegg lcl|tcc:TCM_047093 1 201 + 201 none 96.17 209 95.02 5e-139 RHO-related protein from plants 9
blastp_kegg lcl|gmx:100790459 1 201 + 201 none 95.71 210 94.53 3e-138 rac-like GTP-binding protein ARAC7-like
blastp_kegg lcl|cic:CICLE_v10009470mg 1 206 + 206 Gaps:1 98.10 211 93.24 1e-137 hypothetical protein
blastp_kegg lcl|cit:102625805 1 206 + 206 Gaps:1 98.10 211 93.24 1e-137 rac-like GTP-binding protein ARAC7-like
blastp_kegg lcl|pxb:103943861 1 201 + 201 none 96.17 209 94.03 1e-137 rac-like GTP-binding protein ARAC7
blastp_kegg lcl|gmx:100803222 1 201 + 201 Gaps:2 95.75 212 94.58 2e-137 rac-like GTP-binding protein ARAC7-like
blastp_kegg lcl|sot:102578267 1 200 + 200 none 95.24 210 93.50 2e-137 rac-like GTP-binding protein ARAC7-like
blastp_pdb 2j0v_D 1 201 + 201 Gaps:3 94.34 212 91.50 2e-131 mol:protein length:212 RAC-LIKE GTP-BINDING PROTEIN ARAC7
blastp_pdb 2j0v_C 1 201 + 201 Gaps:3 94.34 212 91.50 2e-131 mol:protein length:212 RAC-LIKE GTP-BINDING PROTEIN ARAC7
blastp_pdb 2j0v_B 1 201 + 201 Gaps:3 94.34 212 91.50 2e-131 mol:protein length:212 RAC-LIKE GTP-BINDING PROTEIN ARAC7
blastp_pdb 2j0v_A 1 201 + 201 Gaps:3 94.34 212 91.50 2e-131 mol:protein length:212 RAC-LIKE GTP-BINDING PROTEIN ARAC7
blastp_pdb 2nty_D 1 180 + 180 none 100.00 180 80.56 2e-107 mol:protein length:180 Rac-like GTP-binding protein ARAC5
blastp_pdb 2nty_C 1 180 + 180 none 100.00 180 80.56 2e-107 mol:protein length:180 Rac-like GTP-binding protein ARAC5
blastp_pdb 2wbl_D 1 180 + 180 none 100.00 180 78.89 4e-107 mol:protein length:180 RAC-LIKE GTP-BINDING PROTEIN ARAC2
blastp_pdb 2wbl_C 1 180 + 180 none 100.00 180 78.89 4e-107 mol:protein length:180 RAC-LIKE GTP-BINDING PROTEIN ARAC2
blastp_pdb 3bwd_D 1 180 + 180 none 98.90 182 78.33 3e-105 mol:protein length:182 Rac-like GTP-binding protein ARAC6
blastp_pdb 1i4l_D 7 189 + 183 Gaps:2 96.35 192 61.62 3e-77 mol:protein length:192 RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1
blastp_uniprot_sprot sp|O82480|RAC7_ARATH 1 201 + 201 Gaps:3 95.69 209 92.00 2e-131 Rac-like GTP-binding protein ARAC7 OS Arabidopsis thaliana GN ARAC7 PE 1 SV 1
blastp_uniprot_sprot sp|Q68Y52|RAC2_ORYSJ 3 199 + 197 Gaps:3 93.46 214 88.00 1e-128 Rac-like GTP-binding protein 2 OS Oryza sativa subsp. japonica GN RAC2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SSX0|RAC1_ORYSJ 2 198 + 197 Gaps:7 95.33 214 80.88 2e-120 Rac-like GTP-binding protein 1 OS Oryza sativa subsp. japonica GN RAC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6Z808|RAC3_ORYSJ 2 200 + 199 Gaps:1 92.52 214 79.80 1e-113 Rac-like GTP-binding protein 3 OS Oryza sativa subsp. japonica GN RAC3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SU67|RAC8_ARATH 2 197 + 196 none 94.23 208 79.59 1e-111 Rac-like GTP-binding protein ARAC8 OS Arabidopsis thaliana GN ARAC8 PE 1 SV 2
blastp_uniprot_sprot sp|Q67VP4|RAC4_ORYSJ 2 181 + 180 none 83.72 215 83.33 6e-111 Rac-like GTP-binding protein 4 OS Oryza sativa subsp. japonica GN RAC4 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z7L8|RAC7_ORYSJ 1 200 + 200 Gaps:3 100.00 197 76.65 1e-110 Rac-like GTP-binding protein 7 OS Oryza sativa subsp. japonica GN RAC7 PE 2 SV 1
blastp_uniprot_sprot sp|O82481|RAC10_ARATH 2 180 + 179 none 83.26 215 83.80 2e-110 Rac-like GTP-binding protein ARAC10 OS Arabidopsis thaliana GN ARAC10 PE 1 SV 1
blastp_uniprot_sprot sp|Q40220|RAC2_LOTJA 1 179 + 179 none 91.33 196 82.68 5e-109 Rac-like GTP-binding protein RAC2 OS Lotus japonicus GN RAC2 PE 2 SV 1
blastp_uniprot_sprot sp|O04369|RAC1_LOTJA 1 192 + 192 none 97.46 197 79.69 1e-108 Rac-like GTP-binding protein RAC1 OS Lotus japonicus GN RAC1 PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 4 194 191 G3DSA:3.40.50.300 none none IPR027417
SMART 7 180 174 SM00175 none Rab subfamily of small GTPases IPR003579
ProSiteProfiles 1 177 177 PS51420 "Reactome:REACT_11044" small GTPase Rho family profile. IPR003578
PANTHER 1 199 199 PTHR24072:SF127 none none none
Pfam 8 178 171 PF00071 none Ras family IPR001806
Phobius 215 218 4 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 5 178 174 SSF52540 none none IPR027417
TIGRFAM 5 172 168 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
Phobius 1 195 195 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 9 180 172 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
PANTHER 1 199 199 PTHR24072 none none none
PRINTS 109 122 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 30 46 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 47 69 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 7 28 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 155 177 23 PR00449 none Transforming protein P21 ras signature IPR001806
SMART 12 207 196 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
Phobius 196 214 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 4 180 177 SM00173 none Ras subfamily of RAS small GTPases IPR020849

1 Localization

Analysis Start End Length
TMHMM 196 215 19

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting