Protein : Qrob_P0109030.2 Q. robur
Protein Identifier  ? Qrob_P0109030.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10809:SF43 - VESICLE-ASSOCIATED PROTEIN 1-3 (PTHR10809:SF43) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005577 1 206 + 206 Gaps:1 85.06 241 84.39 7e-122 Plant VAP
blastp_kegg lcl|cic:CICLE_v10021928mg 1 206 + 206 none 84.77 243 82.52 3e-119 hypothetical protein
blastp_kegg lcl|cit:102610348 1 206 + 206 none 84.77 243 82.52 3e-119 vesicle-associated protein 1-1-like
blastp_kegg lcl|rcu:RCOM_1610520 1 206 + 206 Gaps:1 85.06 241 80.98 2e-117 vesicle-associated membrane protein putative
blastp_kegg lcl|pper:PRUPE_ppa010687mg 1 206 + 206 Gaps:2 85.00 240 81.86 1e-115 hypothetical protein
blastp_kegg lcl|pmum:103331712 1 206 + 206 Gaps:2 85.00 240 81.37 9e-115 vesicle-associated protein 1-2
blastp_kegg lcl|mdm:103404504 1 206 + 206 Gaps:2 85.00 240 79.90 2e-113 vesicle-associated protein 1-2
blastp_kegg lcl|vvi:100257387 1 206 + 206 Gaps:4 84.52 239 83.66 1e-112 vesicle-associated protein 1-2-like
blastp_kegg lcl|pop:POPTR_0014s05980g 1 206 + 206 Gaps:1 85.06 241 79.51 1e-111 VAMP/SYNAPTOBREVIN-ASSOCIATED protein 27-1
blastp_kegg lcl|fve:101305404 1 206 + 206 Gaps:3 84.94 239 79.80 2e-111 vesicle-associated protein 1-2-like
blastp_pdb 3ikk_B 6 125 + 120 Gaps:15 92.13 127 41.03 3e-15 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 3ikk_A 6 125 + 120 Gaps:15 92.13 127 41.03 3e-15 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 2rr3_A 11 128 + 118 Gaps:4 87.69 130 35.09 4e-15 mol:protein length:130 Vesicle-associated membrane protein-associate
blastp_pdb 2cri_A 11 128 + 118 Gaps:4 77.55 147 35.09 2e-14 mol:protein length:147 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_F 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_E 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_D 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_C 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_B 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_A 11 125 + 115 Gaps:4 86.72 128 34.23 8e-14 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_uniprot_sprot sp|Q9SHC8|VAP12_ARATH 3 206 + 204 Gaps:3 84.10 239 75.62 2e-103 Vesicle-associated protein 1-2 OS Arabidopsis thaliana GN PVA12 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VZ95|VAP11_ARATH 1 206 + 206 Gaps:3 79.30 256 71.43 9e-102 Vesicle-associated protein 1-1 OS Arabidopsis thaliana GN PVA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q84WW5|VAP13_ARATH 1 208 + 208 Gaps:6 85.36 239 63.24 4e-80 Vesicle-associated protein 1-3 OS Arabidopsis thaliana GN PVA13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 1 154 + 154 none 53.59 571 62.75 2e-65 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|O82213|VAP31_ARATH 1 127 + 127 none 85.23 149 69.29 5e-58 Vesicle-associated protein 3-1 OS Arabidopsis thaliana GN PVA31 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LVU1|VAP21_ARATH 6 206 + 201 Gaps:32 76.82 220 53.25 3e-49 Vesicle-associated protein 2-1 OS Arabidopsis thaliana GN PVA21 PE 2 SV 1
blastp_uniprot_sprot sp|B9DHD7|VAP22_ARATH 6 136 + 131 Gaps:2 34.46 386 57.89 1e-44 Vesicle-associated protein 2-2 OS Arabidopsis thaliana GN PVA22 PE 1 SV 1
blastp_uniprot_sprot sp|Q10484|YDFC_SCHPO 14 125 + 112 Gaps:2 35.11 319 39.29 1e-16 Uncharacterized protein C17C9.12 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC17C9.12 PE 1 SV 2
blastp_uniprot_sprot sp|O60119|YH75_SCHPO 38 156 + 119 Gaps:5 31.85 383 41.80 2e-16 Vesicle-associated membrane protein-associated protein C16G5.05c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC16G5.05c PE 1 SV 1
blastp_uniprot_sprot sp|Q16943|VP33_APLCA 7 206 + 200 Gaps:33 69.62 260 37.57 2e-15 Vesicle-associated membrane protein/synaptobrevin-binding protein OS Aplysia californica PE 2 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 185 206 22 Coil none none none
Gene3D 3 124 122 G3DSA:2.60.40.360 none none IPR008962
PIRSF 1 213 213 PIRSF019693 "Reactome:REACT_22258" none IPR016763
PANTHER 1 208 208 PTHR10809:SF43 none none none
SUPERFAMILY 2 141 140 SSF49354 none none IPR008962
PANTHER 1 208 208 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763
Pfam 7 110 104 PF00635 none MSP (Major sperm protein) domain IPR000535
ProSiteProfiles 6 126 121 PS50202 none Major sperm protein (MSP) domain profile. IPR000535

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting