Protein : Qrob_P0107270.2 Q. robur
Protein Identifier  ? Qrob_P0107270.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=11) 3.2.1.37 - Xylan 1,4-beta-xylosidase. Code Enzyme  EC:3.2.1.37
Gene Prediction Quality  validated Protein length 

Sequence

Length: 781  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10018959mg 6 780 + 775 Gaps:5 100.00 770 81.30 0.0 hypothetical protein
blastp_kegg lcl|cit:102625511 6 780 + 775 Gaps:5 100.00 770 81.30 0.0 probable beta-D-xylosidase 2-like
blastp_kegg lcl|rcu:RCOM_1347430 30 780 + 751 Gaps:6 97.01 768 81.74 0.0 Beta-glucosidase putative (EC:3.2.1.21)
blastp_kegg lcl|pop:POPTR_0002s19830g 22 780 + 759 Gaps:5 98.18 770 80.42 0.0 POPTRDRAFT_755637 hypothetical protein
blastp_kegg lcl|tcc:TCM_004787 29 780 + 752 Gaps:4 91.44 818 81.42 0.0 Beta-xylosidase 2
blastp_kegg lcl|gmx:100778624 29 780 + 752 Gaps:8 97.28 771 80.67 0.0 probable beta-D-xylosidase 2-like
blastp_kegg lcl|vvi:100252178 1 780 + 780 Gaps:14 100.00 768 78.78 0.0 probable beta-D-xylosidase 2-like
blastp_kegg lcl|gmx:100798630 29 780 + 752 Gaps:8 97.15 772 80.80 0.0 probable beta-D-xylosidase 2-like
blastp_kegg lcl|gmx:100789316 1 780 + 780 Gaps:13 96.63 802 78.32 0.0 probable beta-D-xylosidase 2-like
blastp_kegg lcl|mtr:MTR_7g109390 1 780 + 780 Gaps:13 100.00 771 78.86 0.0 Beta-xylosidase
blastp_pdb 2x41_A 57 732 + 676 Gaps:167 93.07 721 30.40 3e-42 mol:protein length:721 BETA-GLUCOSIDASE
blastp_pdb 2x40_A 57 732 + 676 Gaps:167 93.07 721 30.40 3e-42 mol:protein length:721 BETA-GLUCOSIDASE
blastp_pdb 2x42_A 57 732 + 676 Gaps:167 93.07 721 30.25 2e-41 mol:protein length:721 BETA-GLUCOSIDASE
blastp_pdb 3rrx_A 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 3ut0_D 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 3ut0_C 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 3ut0_B 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 3ut0_A 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 3usz_A 92 597 + 506 Gaps:75 59.49 822 30.67 1e-33 mol:protein length:822 Exo-1 3/1 4-beta-glucanase
blastp_pdb 1j8v_A 51 599 + 549 Gaps:116 94.71 605 28.97 2e-29 mol:protein length:605 Beta-D-glucan glucohydrolase isoenzyme EXO1
blastp_uniprot_sprot sp|Q94KD8|BXL2_ARATH 12 780 + 769 Gaps:9 98.96 768 74.74 0.0 Probable beta-D-xylosidase 2 OS Arabidopsis thaliana GN BXL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FGY1|BXL1_ARATH 12 771 + 760 Gaps:24 97.42 774 69.63 0.0 Beta-D-xylosidase 1 OS Arabidopsis thaliana GN BXL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FLG1|BXL4_ARATH 5 771 + 767 Gaps:20 98.34 784 58.63 0.0 Beta-D-xylosidase 4 OS Arabidopsis thaliana GN BXL4 PE 1 SV 1
blastp_uniprot_sprot sp|A5JTQ3|XYL2_MEDSV 1 770 + 770 Gaps:18 99.74 774 56.99 0.0 Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS Medicago sativa subsp. varia GN Xyl2 PE 2 SV 1
blastp_uniprot_sprot sp|A5JTQ2|XYL1_MEDSV 10 771 + 762 Gaps:11 98.06 774 57.31 0.0 Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS Medicago sativa subsp. varia GN Xyl1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LXD6|BXL3_ARATH 34 770 + 737 Gaps:13 95.47 773 57.18 0.0 Beta-D-xylosidase 3 OS Arabidopsis thaliana GN BXL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LJN4|BXL5_ARATH 16 762 + 747 Gaps:21 96.03 781 55.33 0.0 Probable beta-D-xylosidase 5 OS Arabidopsis thaliana GN BXL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LXA8|BXL6_ARATH 12 771 + 760 Gaps:40 98.99 792 47.32 0.0 Probable beta-D-xylosidase 6 OS Arabidopsis thaliana GN BXL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SGZ5|BXL7_ARATH 33 765 + 733 Gaps:23 96.22 767 48.24 0.0 Probable beta-D-xylosidase 7 OS Arabidopsis thaliana GN BXL7 PE 2 SV 2
blastp_uniprot_sprot sp|P83344|XYNB_PRUPE 320 779 + 460 Gaps:2 99.78 461 68.91 0.0 Putative beta-D-xylosidase (Fragment) OS Prunus persica PE 2 SV 1

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 26 780 755 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 404 637 234 SSF52279 none none IPR002772
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 676 779 104 PTHR30620 none none IPR026892
PANTHER 6 658 653 PTHR30620 none none IPR026892
Phobius 10 20 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 676 779 104 PTHR30620:SF4 none none none
PANTHER 6 658 653 PTHR30620:SF4 none none none
Pfam 71 361 291 PF00933 none Glycosyl hydrolase family 3 N terminal domain IPR001764
SUPERFAMILY 47 403 357 SSF51445 none none IPR017853
Pfam 404 635 232 PF01915 none Glycosyl hydrolase family 3 C-terminal domain IPR002772
Gene3D 390 636 247 G3DSA:3.40.50.1700 none none IPR002772
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 47 375 329 G3DSA:3.20.20.300 none none IPR001764
PRINTS 119 138 20 PR00133 none Glycosyl hydrolase family 3 signature IPR001764
PRINTS 284 302 19 PR00133 none Glycosyl hydrolase family 3 signature IPR001764
PRINTS 210 226 17 PR00133 none Glycosyl hydrolase family 3 signature IPR001764
Phobius 21 25 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 700 763 64 PF14310 none Fibronectin type III-like domain IPR026891

1 Localization

Analysis Start End Length
SignalP_EUK 1 30 29

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Secretory pathway 1 0.977 0.014 NON-PLANT 30