Protein : Qrob_P0107220.2 Q. robur
Protein Identifier  ? Qrob_P0107220.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) KOG0070//KOG0071//KOG0072//KOG0073//KOG0074//KOG0075//KOG0076//KOG0077//KOG0082//KOG0090 - GTP-binding ADP-ribosylation factor Arf1 [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor Arf6 (dArf3) [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor-like protein ARL1 [Intracellular trafficking secretion and vesicular transport]. // GTP-binding ADP-ribosylation factor-like protein ARL2 [Intracellular trafficking secretion and vesicular transport Cytoskeleton]. // GTP-binding ADP-ribosylation factor-like protein ARL3 [General function prediction only]. // GTP-binding ADP-ribosylation factor-like protein [General function prediction only]. // GTP-binding ADP-ribosylation factor-like protein yARL3 [Intracellular trafficking secretion and vesicular transport]. // Vesicle coat complex COPII GTPase subunit SAR1 [Intracellular trafficking secretion and vesicular transport]. // G-protein alpha subunit (small G protein superfamily) [Cell cycle control cell division chromosome partitioning Signal transduction mechanisms]. // Signal recognition particle receptor beta subunit (small G protein superfamily) [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 194  
Kegg Orthology  K07953
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103334046 1 193 + 193 none 100.00 193 98.45 6e-137 GTP-binding protein SAR1A-like
blastp_kegg lcl|vvi:100248702 1 193 + 193 none 100.00 193 97.93 1e-136 GTP-binding protein SAR1A-like
blastp_kegg lcl|pper:PRUPE_ppa011838mg 1 193 + 193 none 100.00 193 97.93 2e-136 hypothetical protein
blastp_kegg lcl|vvi:100240934 1 193 + 193 none 100.00 193 97.93 4e-136 GTP-binding protein SAR1A-like
blastp_kegg lcl|rcu:RCOM_1347400 1 193 + 193 none 100.00 193 97.93 4e-136 GTP-binding protein sar1 putative
blastp_kegg lcl|fve:101301011 1 193 + 193 none 100.00 193 97.93 4e-136 GTP-binding protein SAR1A-like
blastp_kegg lcl|cmo:103492761 1 193 + 193 none 100.00 193 97.41 5e-136 GTP-binding protein SAR1A
blastp_kegg lcl|cic:CICLE_v10022379mg 1 193 + 193 none 100.00 193 97.41 7e-136 hypothetical protein
blastp_kegg lcl|cit:102626272 1 193 + 193 none 100.00 193 97.41 7e-136 GTP-binding protein SAR1A-like
blastp_kegg lcl|pxb:103967165 1 193 + 193 none 100.00 193 97.41 8e-136 GTP-binding protein SAR1A
blastp_pdb 1f6b_B 2 192 + 191 Gaps:4 98.48 198 61.03 5e-84 mol:protein length:198 SAR1
blastp_pdb 1f6b_A 2 192 + 191 Gaps:4 98.48 198 61.03 5e-84 mol:protein length:198 SAR1
blastp_pdb 2fmx_B 7 192 + 186 none 95.38 195 61.83 6e-82 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fmx_A 7 192 + 186 none 95.38 195 61.83 6e-82 mol:protein length:195 GTP-binding protein SAR1b
blastp_pdb 2fa9_B 7 192 + 186 none 98.41 189 61.29 1e-80 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2fa9_A 7 192 + 186 none 98.41 189 61.29 1e-80 mol:protein length:189 GTP-binding protein SAR1b
blastp_pdb 2gao_B 5 192 + 188 none 90.38 208 60.11 9e-80 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 2gao_A 5 192 + 188 none 90.38 208 60.11 9e-80 mol:protein length:208 GTP-binding protein SAR1a
blastp_pdb 1m2o_D 3 192 + 190 Gaps:5 97.37 190 64.32 9e-79 mol:protein length:190 GTP-binding protein SAR1
blastp_pdb 1m2o_B 3 192 + 190 Gaps:5 97.37 190 64.32 9e-79 mol:protein length:190 GTP-binding protein SAR1
blastp_uniprot_sprot sp|O04834|SAR1A_ARATH 1 193 + 193 none 100.00 193 94.82 2e-134 GTP-binding protein SAR1A OS Arabidopsis thaliana GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|Q01474|SAR1B_ARATH 1 192 + 192 none 99.48 193 95.31 2e-133 GTP-binding protein SAR1B OS Arabidopsis thaliana GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|O04266|SAR1A_BRACM 1 193 + 193 none 100.00 193 94.30 1e-132 GTP-binding protein SAR1A OS Brassica campestris GN SAR1A PE 2 SV 1
blastp_uniprot_sprot sp|O04267|SAR1B_BRACM 1 192 + 192 Gaps:2 99.49 195 93.30 1e-129 GTP-binding protein SAR1B OS Brassica campestris GN SAR1B PE 2 SV 1
blastp_uniprot_sprot sp|P52884|SAR2_SOLLC 1 193 + 193 none 100.00 193 89.12 5e-127 GTP-binding protein SAR2 OS Solanum lycopersicum GN SAR2 PE 2 SV 1
blastp_uniprot_sprot sp|P52885|SAR1_TOBAC 1 193 + 193 Gaps:5 100.00 198 76.77 2e-103 GTP-binding protein SAR1 OS Nicotiana tabacum GN SAR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q4P0I7|SAR1_USTMA 1 192 + 192 Gaps:3 100.00 189 67.20 5e-89 Small COPII coat GTPase SAR1 OS Ustilago maydis (strain 521 / FGSC 9021) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CB54|SAR1_YARLI 1 192 + 192 Gaps:2 100.00 190 67.37 7e-88 Small COPII coat GTPase SAR1 OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CR30|SAR1_CRYNJ 1 192 + 192 Gaps:3 100.00 189 67.72 2e-87 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN SAR1 PE 3 SV 1
blastp_uniprot_sprot sp|P0CR31|SAR1_CRYNB 1 192 + 192 Gaps:3 100.00 189 67.72 2e-87 Small COPII coat GTPase SAR1 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN SAR1 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 15 193 179 G3DSA:3.40.50.300 none none IPR027417
SMART 4 193 190 SM00177 none ARF-like small GTPases IPR024156
ProSiteProfiles 14 192 179 PS51422 none small GTPase SAR1 family profile. IPR006687
PRINTS 122 143 22 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 166 190 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 77 102 26 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 22 45 24 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 50 74 25 PR00328 none GTP-binding SAR1 protein signature IPR006689
TIGRFAM 19 135 117 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
Pfam 8 192 185 PF00025 none ADP-ribosylation factor family IPR006689
SMART 4 192 189 SM00178 none Sar1p-like members of the Ras-family of small GTPases IPR006687
SUPERFAMILY 17 192 176 SSF52540 none none IPR027417
PANTHER 1 193 193 PTHR11711:SF12 none none IPR006687
PANTHER 1 193 193 PTHR11711 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 3 0.781 0.052 NON-PLANT 21