Protein : Qrob_P0107150.2 Q. robur
Protein Identifier  ? Qrob_P0107150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K11797 - PH-interacting protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1122  
Kegg Orthology  K11797
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100248563 2 1121 + 1120 Gaps:83 66.53 1766 58.72 0.0 uncharacterized LOC100248563
blastp_kegg lcl|cic:CICLE_v10018465mg 2 1121 + 1120 Gaps:72 65.89 1727 57.73 0.0 hypothetical protein
blastp_kegg lcl|cit:102628602 2 1121 + 1120 Gaps:72 65.89 1727 57.73 0.0 bromodomain and WD repeat-containing protein 1-like
blastp_kegg lcl|tcc:TCM_004804 2 1121 + 1120 Gaps:88 65.29 1691 57.25 0.0 WD40/YVTN repeat-like-containing domain Bromodomain isoform 1
blastp_kegg lcl|pmum:103334055 2 1121 + 1120 Gaps:117 63.93 1647 57.26 0.0 PH-interacting protein
blastp_kegg lcl|gmx:100796497 2 1121 + 1120 Gaps:93 65.63 1708 52.81 0.0 bromodomain and WD repeat-containing protein 3-like
blastp_kegg lcl|gmx:100784354 2 1121 + 1120 Gaps:137 65.35 1694 54.47 0.0 bromodomain and WD repeat-containing protein 3-like
blastp_kegg lcl|vvi:100248159 2 1121 + 1120 Gaps:124 66.40 1756 51.97 0.0 uncharacterized LOC100248159
blastp_kegg lcl|pxb:103931974 2 1121 + 1120 Gaps:92 64.84 1681 53.49 0.0 PH-interacting protein-like
blastp_kegg lcl|pvu:PHAVU_007G214600g 2 1121 + 1120 Gaps:113 77.60 1424 53.85 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q54MP8|Y5837_DICDI 3 131 + 129 Gaps:9 6.18 2200 38.24 6e-21 Bromodomain and WD repeat-containing DDB_G0285837 OS Dictyostelium discoideum GN DDB_G0285837 PE 4 SV 1
blastp_uniprot_sprot sp|Q8WWQ0|PHIP_HUMAN 3 1098 + 1096 Gaps:55 23.23 1821 30.02 6e-19 PH-interacting protein OS Homo sapiens GN PHIP PE 1 SV 2
blastp_uniprot_sprot sp|Q8VDD9|PHIP_MOUSE 3 1098 + 1096 Gaps:55 23.23 1821 29.79 8e-19 PH-interacting protein OS Mus musculus GN Phip PE 1 SV 2
blastp_uniprot_sprot sp|Q9NSI6|BRWD1_HUMAN 3 1098 + 1096 Gaps:61 18.23 2320 31.68 1e-18 Bromodomain and WD repeat-containing protein 1 OS Homo sapiens GN BRWD1 PE 1 SV 4
blastp_uniprot_sprot sp|Q6RI45|BRWD3_HUMAN 3 1098 + 1096 Gaps:55 23.47 1802 29.79 2e-18 Bromodomain and WD repeat-containing protein 3 OS Homo sapiens GN BRWD3 PE 1 SV 2
blastp_uniprot_sprot sp|A2AHJ4|BRWD3_MOUSE 3 1098 + 1096 Gaps:55 23.51 1799 29.79 3e-18 Bromodomain and WD repeat-containing protein 3 OS Mus musculus GN Brwd3 PE 2 SV 1
blastp_uniprot_sprot sp|Q921C3|BRWD1_MOUSE 3 1098 + 1096 Gaps:61 18.36 2304 31.44 2e-17 Bromodomain and WD repeat-containing protein 1 OS Mus musculus GN Brwd1 PE 1 SV 2
rpsblast_cdd gnl|CDD|99958 998 1121 + 124 Gaps:6 98.44 128 45.24 2e-29 cd05529 Bromo_WDR9_I_like Bromodomain WDR9 repeat I_like subfamily. WDR9 is a human gene located in the Down Syndrome critical region-2 of chromosome 21. It encodes for a nuclear protein containing WD40 repeats and two bromodomains which may function as a transcriptional regulator involved in chromatin remodeling and play a role in embryonic development. Bromodomains are 110 amino acid long domains that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine..
rpsblast_kog gnl|CDD|35863 2 1121 + 1120 Gaps:124 64.33 1113 49.86 9e-82 KOG0644 KOG0644 KOG0644 Uncharacterized conserved protein contains WD40 repeat and BROMO domains [General function prediction only].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 1071 1120 50 G3DSA:1.20.920.10 none none IPR001487
PANTHER 3 423 421 PTHR16266:SF17 none none none
SUPERFAMILY 1063 1103 41 SSF47370 none none IPR001487
SUPERFAMILY 5 83 79 SSF69322 none none none
PANTHER 793 1099 307 PTHR16266:SF17 none none none
Gene3D 5 78 74 G3DSA:2.130.10.10 none none IPR015943
PANTHER 793 1099 307 PTHR16266 none none none
PANTHER 3 423 421 PTHR16266 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting