Protein : Qrob_P0106980.2 Q. robur
Protein Identifier  ? Qrob_P0106980.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 327  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

0 GO Terms

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa008545mg 2 326 + 325 Gaps:4 98.78 327 76.78 0.0 hypothetical protein
blastp_kegg lcl|pmum:103334007 2 326 + 325 Gaps:4 98.78 327 76.78 0.0 uncharacterized LOC103334007
blastp_kegg lcl|tcc:TCM_004815 1 324 + 324 Gaps:3 99.38 325 73.99 1e-174 Calcium-dependent phosphotriesterase superfamily protein
blastp_kegg lcl|cic:CICLE_v10021076mg 1 325 + 325 Gaps:7 98.80 332 72.87 3e-174 hypothetical protein
blastp_kegg lcl|csv:101228903 1 326 + 326 Gaps:4 100.00 326 73.93 2e-173 uncharacterized LOC101228903
blastp_kegg lcl|csv:101220240 1 326 + 326 Gaps:4 100.00 326 73.93 2e-173 uncharacterized LOC101220240
blastp_kegg lcl|cit:102631215 1 325 + 325 Gaps:7 98.80 332 72.56 4e-173 uncharacterized LOC102631215
blastp_kegg lcl|fve:101297546 4 326 + 323 Gaps:3 98.17 328 72.98 6e-173 uncharacterized protein LOC101297546
blastp_kegg lcl|pxb:103967185 2 326 + 325 Gaps:4 98.48 328 75.54 8e-173 uncharacterized LOC103967185
blastp_kegg lcl|gmx:100805536 1 324 + 324 Gaps:2 100.00 324 75.00 1e-172 uncharacterized LOC100805536

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 24 326 303 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 13 319 307 PTHR31460 none none none
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 84 305 222 G3DSA:2.120.10.30 none none IPR011042
SUPERFAMILY 35 305 271 SSF63829 none none none
PANTHER 13 319 307 PTHR31460:SF0 none none none

2 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
TMHMM 7 29 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.983 0.012 NON-PLANT 23