Protein : Qrob_P0106970.2 Q. robur
Protein Identifier  ? Qrob_P0106970.2 Organism . Name  Quercus robur
Score  67.3 Score Type  egn
Protein Description  (M=35) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p // PMR5 N terminal Domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 501  
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0 Synonyms

0 GO Terms

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa004056mg 1 497 + 497 Gaps:39 100.00 532 67.48 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1347130 1 500 + 500 Gaps:60 99.11 563 60.39 0.0 hypothetical protein
blastp_kegg lcl|pmum:103334069 1 475 + 475 Gaps:39 100.00 510 67.45 0.0 protein trichome birefringence-like 6
blastp_kegg lcl|fve:101300923 1 497 + 497 Gaps:21 100.00 508 66.93 0.0 uncharacterized protein LOC101300923
blastp_kegg lcl|cit:102606621 1 500 + 500 Gaps:42 99.81 539 61.52 0.0 protein YLS7-like
blastp_kegg lcl|pop:POPTR_0002s19680g 1 499 + 499 Gaps:43 97.97 492 68.67 0.0 POPTRDRAFT_755648 hypothetical protein
blastp_kegg lcl|vvi:100260535 1 500 + 500 Gaps:39 88.28 563 67.20 0.0 uncharacterized LOC100260535
blastp_kegg lcl|tcc:TCM_004816 1 500 + 500 Gaps:39 98.18 549 62.52 0.0 Trichome birefringence-like 6
blastp_kegg lcl|pxb:103967183 1 497 + 497 Gaps:76 100.00 565 59.65 0.0 protein trichome birefringence-like 6
blastp_kegg lcl|mdm:103432625 1 497 + 497 Gaps:38 100.00 525 62.86 0.0 protein trichome birefringence-like 6
blastp_uniprot_sprot sp|Q9LZQ1|TBL6_ARATH 1 500 + 500 Gaps:39 100.00 475 61.05 0.0 Protein trichome birefringence-like 6 OS Arabidopsis thaliana GN TBL6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LHL6|TBL1_ARATH 157 499 + 343 Gaps:8 62.77 556 54.44 1e-132 Protein trichome birefringence-like 1 OS Arabidopsis thaliana GN TBL1 PE 2 SV 1
blastp_uniprot_sprot sp|F4K5K4|TBL5_ARATH 157 497 + 341 Gaps:7 71.75 485 51.72 6e-130 Protein trichome birefringence-like 5 OS Arabidopsis thaliana GN TBL5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FG35|TBR_ARATH 160 496 + 337 Gaps:8 56.41 608 52.77 5e-128 Protein trichome birefringence OS Arabidopsis thaliana GN TBR PE 1 SV 1
blastp_uniprot_sprot sp|Q8VYR3|TBL2_ARATH 102 496 + 395 Gaps:11 74.31 541 48.76 2e-127 Protein trichome birefringence-like 2 OS Arabidopsis thaliana GN TBL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ06|TBL4_ARATH 158 496 + 339 Gaps:8 75.93 457 48.70 2e-115 Protein trichome birefringence-like 4 OS Arabidopsis thaliana GN TBL4 PE 3 SV 1
blastp_uniprot_sprot sp|Q5BPJ0|TBL11_ARATH 163 496 + 334 Gaps:12 74.57 464 46.82 4e-108 Protein trichome birefringence-like 11 OS Arabidopsis thaliana GN TBL11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LDG2|TBL10_ARATH 163 499 + 337 Gaps:9 73.77 469 47.40 3e-107 Protein trichome birefringence-like 10 OS Arabidopsis thaliana GN TBL10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFZ4|TBL9_ARATH 161 498 + 338 Gaps:16 84.26 413 44.83 4e-93 Protein trichome birefringence-like 9 OS Arabidopsis thaliana GN TBL9 PE 2 SV 1
blastp_uniprot_sprot sp|F4I037|TBL7_ARATH 162 496 + 335 Gaps:13 73.26 445 42.94 1e-91 Protein trichome berefringence-like 7 OS Arabidopsis thaliana GN TBL7 PE 3 SV 1
rpsblast_cdd gnl|CDD|206010 215 496 + 282 Gaps:18 100.00 270 47.04 1e-89 pfam13839 PC-Esterase GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p. The PC-Esterase family is comprised of Cas1p the Homo sapiens C7orf58 Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1 animal FAM55D proteins and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain in addition with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5 ESK1 TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain.
rpsblast_cdd gnl|CDD|178236 163 496 + 334 Gaps:23 86.05 387 40.84 6e-83 PLN02629 PLN02629 powdery mildew resistance 5.
rpsblast_cdd gnl|CDD|206583 160 214 + 55 none 100.00 55 67.27 1e-24 pfam14416 PMR5N PMR5 N terminal Domain. The plant family with PMR5 ESK1 TBL3 etc have a N-terminal C rich predicted sugar binding domain followed by the PC-Esterase (acyl esterase) domain.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 36 500 465 PTHR32285 none none IPR029962
Phobius 12 36 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 36 500 465 PTHR32285:SF16 none none IPR029965
Phobius 37 500 464 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 215 496 282 PF13839 none GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p IPR026057
Pfam 161 214 54 PF14416 none PMR5 N terminal Domain IPR025846
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 13 35 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 3 0.779 0.256 NON-PLANT 35