Protein : Qrob_P0106610.2 Q. robur
Protein Identifier  ? Qrob_P0106610.2 Organism . Name  Quercus robur
Score  91.1 Score Type  egn
Protein Description  (M=1) 2.5.1.87 - Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific). Code Enzyme  EC:2.5.1.87
Gene Prediction Quality  validated Protein length 

Sequence

Length: 299  
Kegg Orthology  K11778
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor).

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103449834 1 286 + 286 Gaps:33 100.00 253 71.94 4e-121 nogo-B receptor
blastp_kegg lcl|pxb:103964605 1 286 + 286 Gaps:33 100.00 253 71.54 3e-120 nogo-B receptor
blastp_kegg lcl|pper:PRUPE_ppa010395mg 1 286 + 286 Gaps:36 99.60 251 72.40 8e-120 hypothetical protein
blastp_kegg lcl|pop:POPTR_0004s16020g 1 285 + 285 Gaps:31 99.61 255 68.11 5e-119 POPTRDRAFT_712930 hypothetical protein
blastp_kegg lcl|cit:102614870 1 286 + 286 Gaps:31 100.00 255 68.63 2e-118 nogo-B receptor-like
blastp_kegg lcl|vvi:100852815 1 285 + 285 Gaps:31 99.61 255 65.75 3e-112 nogo-B receptor-like
blastp_kegg lcl|pmum:103343378 28 286 + 259 Gaps:34 88.93 253 75.11 9e-111 nogo-B receptor-like
blastp_kegg lcl|tcc:TCM_047000 1 286 + 286 Gaps:31 100.00 255 65.10 3e-109 Undecaprenyl pyrophosphate synthetase family protein putative
blastp_kegg lcl|pmum:103335624 1 286 + 286 Gaps:36 100.00 250 72.00 3e-109 nogo-B receptor-like
blastp_kegg lcl|pmum:103343427 16 286 + 271 Gaps:34 97.93 242 74.26 3e-108 nogo-B receptor-like
blastp_uniprot_sprot sp|Q96E22|NGBR_HUMAN 72 286 + 215 Gaps:25 64.85 293 28.95 1e-17 Nogo-B receptor OS Homo sapiens GN NUS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6DHR8|NGBR_DANRE 69 286 + 218 Gaps:23 71.17 274 30.77 4e-15 Nogo-B receptor OS Danio rerio GN nus1 PE 2 SV 1
blastp_uniprot_sprot sp|Q99LJ8|NGBR_MOUSE 83 286 + 204 Gaps:41 60.27 297 29.05 4e-13 Nogo-B receptor OS Mus musculus GN Nus1 PE 2 SV 1
blastp_uniprot_sprot sp|Q12063|UPPS_YEAST 83 286 + 204 Gaps:17 53.07 375 29.15 2e-11 Probable undecaprenyl pyrophosphate synthase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN NUS1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9Y7K8|UPPS_SCHPO 86 285 + 200 Gaps:27 67.83 258 27.43 4e-09 Probable undecaprenyl pyrophosphate synthase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN nus1 PE 3 SV 1
rpsblast_kog gnl|CDD|38029 83 286 + 204 Gaps:25 68.82 263 25.97 2e-14 KOG2818 KOG2818 KOG2818 Predicted undecaprenyl diphosphate synthase [Lipid transport and metabolism].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 286 286 PTHR21528:SF0 none none none
Phobius 1 19 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 81 286 206 G3DSA:3.40.1180.10 none none IPR001441
Phobius 20 39 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 286 286 PTHR21528 none none none
Phobius 40 298 259 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 68 278 211 SSF64005 none none IPR001441

1 Localization

Analysis Start End Length
TMHMM 17 39 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 35   Secretory pathway 3 0.713 0.067 NON-PLANT 35