Protein : Qrob_P0105520.2 Q. robur
Protein Identifier  ? Qrob_P0105520.2 Organism . Name  Quercus robur
Score  98.2 Score Type  egn
Protein Description  (M=7) PTHR31042:SF8 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN (PTHR31042:SF8) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 401  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0008375 acetylglucosaminyltransferase activity Catalysis of the transfer of an N-acetylglucosaminyl residue from UDP-N-acetyl-glucosamine to a sugar.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100244641 1 400 + 400 Gaps:14 100.00 414 65.94 0.0 uncharacterized LOC100244641
blastp_kegg lcl|pxb:103937474 2 400 + 399 Gaps:28 99.51 411 66.26 0.0 uncharacterized LOC103937474
blastp_kegg lcl|pop:POPTR_0004s09690g 29 400 + 372 Gaps:21 99.72 356 72.39 0.0 POPTRDRAFT_856090 hypothetical protein
blastp_kegg lcl|pxb:103936628 84 400 + 317 Gaps:3 56.63 558 77.85 2e-180 uncharacterized LOC103936628
blastp_kegg lcl|pmum:103342693 88 400 + 313 Gaps:1 92.08 341 77.07 3e-180 uncharacterized LOC103342693
blastp_kegg lcl|tcc:TCM_019407 1 400 + 400 Gaps:21 100.00 421 61.52 1e-177 Core-2/I-branching beta-1 6-N-acetylglucosaminyltransferase family protein
blastp_kegg lcl|pxb:103948560 84 399 + 316 Gaps:2 63.71 496 75.95 1e-176 uncharacterized LOC103948560
blastp_kegg lcl|cmo:103500127 1 400 + 400 Gaps:33 100.00 423 62.65 2e-169 uncharacterized LOC103500127
blastp_kegg lcl|cic:CICLE_v10013811mg 87 400 + 314 Gaps:3 98.12 319 73.16 3e-169 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1728160 79 400 + 322 Gaps:3 86.06 373 71.34 3e-168 hypothetical protein
rpsblast_cdd gnl|CDD|202252 131 358 + 228 Gaps:16 100.00 242 50.00 5e-73 pfam02485 Branch Core-2/I-Branching enzyme. This is a family of two different beta-1 6-N-acetylglucosaminyltransferase enzymes I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 78 400 323 PTHR31042 none none none
Pfam 131 358 228 PF02485 none Core-2/I-Branching enzyme IPR003406
Phobius 24 44 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 45 400 356 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 23 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 78 400 323 PTHR31042:SF8 none none none

1 Localization

Analysis Start End Length
TMHMM 21 43 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting