Protein : Qrob_P0105340.2 Q. robur
Protein Identifier  ? Qrob_P0105340.2 Organism . Name  Quercus robur
Protein Description  (M=21) PF13947//PF14380 - Wall-associated receptor kinase galacturonan-binding // Wall-associated receptor kinase C-terminal Alias (in v1)  Qrob_P0491350.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 273  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100811407 5 265 + 261 Gaps:13 36.44 730 43.61 1e-58 probable serine/threonine-protein kinase At1g18390-like
blastp_kegg lcl|pvu:PHAVU_008G007900g 13 271 + 259 Gaps:24 37.34 683 43.92 8e-54 hypothetical protein
blastp_kegg lcl|tcc:TCM_019390 1 259 + 259 Gaps:16 44.72 597 39.33 1e-53 Kinase superfamily protein
blastp_kegg lcl|pper:PRUPE_ppb020170mg 1 260 + 260 Gaps:14 89.26 298 40.98 1e-53 hypothetical protein
blastp_kegg lcl|mdm:103444142 1 260 + 260 Gaps:18 97.74 266 41.54 3e-53 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|rcu:RCOM_1729460 5 265 + 261 Gaps:15 37.96 685 45.38 9e-53 wall-associated kinase putative (EC:2.7.10.2)
blastp_kegg lcl|pmum:103328636 1 260 + 260 Gaps:14 38.16 697 41.73 1e-52 probable serine/threonine-protein kinase At1g18390
blastp_kegg lcl|pop:POPTR_0005s15410g 1 264 + 264 Gaps:14 43.80 621 41.18 2e-52 kinase family protein
blastp_kegg lcl|pop:POPTR_0004s09610g 1 252 + 252 Gaps:16 37.89 681 41.09 3e-52 hypothetical protein
blastp_kegg lcl|mdm:103416165 1 265 + 265 Gaps:14 94.64 280 40.75 7e-52 probable receptor-like protein kinase At1g67000
blastp_uniprot_sprot sp|Q3ECH2|Y1670_ARATH 1 258 + 258 Gaps:53 51.68 892 30.15 2e-27 Probable receptor-like protein kinase At1g67000 OS Arabidopsis thaliana GN At1g67000 PE 2 SV 2
blastp_uniprot_sprot sp|P0C5E2|Y1839_ARATH 12 253 + 242 Gaps:27 34.71 654 30.40 7e-17 Probable serine/threonine-protein kinase At1g18390 OS Arabidopsis thaliana GN At1g18390 PE 2 SV 2
blastp_uniprot_sprot sp|Q5BQ05|Y1838_ARATH 50 259 + 210 Gaps:21 78.00 250 27.69 7e-13 Uncharacterized protein At1g18380 OS Arabidopsis thaliana GN At1g18380 PE 2 SV 1
rpsblast_cdd gnl|CDD|206548 155 254 + 100 Gaps:8 100.00 94 32.98 1e-12 pfam14380 WAK_assoc Wall-associated receptor kinase C-terminal. This WAK_assoc domain is cysteine-rich and lies C-terminal to the binding domain GUB_WAK_bind pfam13947.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 41 141 101 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287
Phobius 21 28 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 155 253 99 PF14380 none Wall-associated receptor kinase C-terminal none
Phobius 29 272 244 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 9 20 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 8 8 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 28 27
TMHMM 5 27 22
SignalP_GRAM_POSITIVE 1 29 28

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 1 0.980 0.013 NON-PLANT 28