Protein : Qrob_P0104570.2 Q. robur
Protein Identifier  ? Qrob_P0104570.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) K11968 - ariadne-1 Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 521  
Kegg Orthology  K11968
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101493018 1 517 + 517 Gaps:36 92.35 588 51.93 0.0 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|gmx:100784195 1 517 + 517 Gaps:35 92.15 586 52.22 0.0 ARI1 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|cit:102630454 1 511 + 511 Gaps:44 91.26 595 52.30 0.0 probable E3 ubiquitin-protein ligase ARI8-like
blastp_kegg lcl|gmx:100795162 1 517 + 517 Gaps:40 93.00 586 52.48 0.0 ARI2 probable E3 ubiquitin-protein ligase ARI7-like
blastp_kegg lcl|cmo:103485827 49 518 + 470 Gaps:30 82.08 597 55.31 0.0 probable E3 ubiquitin-protein ligase ARI8
blastp_kegg lcl|mus:103995991 1 520 + 520 Gaps:38 92.67 587 51.84 0.0 probable E3 ubiquitin-protein ligase ARI8 isoform X1
blastp_kegg lcl|pmum:103322404 1 500 + 500 Gaps:36 89.91 585 53.23 0.0 probable E3 ubiquitin-protein ligase ARI7
blastp_kegg lcl|pper:PRUPE_ppa003187mg 46 517 + 472 Gaps:29 82.52 595 56.21 0.0 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_005G152000g 1 502 + 502 Gaps:43 89.66 590 52.93 0.0 hypothetical protein
blastp_kegg lcl|vvi:100257000 1 501 + 501 Gaps:41 80.37 652 54.58 0.0 probable E3 ubiquitin-protein ligase ARI8-like
blastp_pdb 1wd2_A 286 334 + 49 Gaps:1 83.33 60 56.00 3e-11 mol:protein length:60 Ariadne-1 protein homolog
blastp_uniprot_sprot sp|Q8L829|ARI5_ARATH 23 508 + 486 Gaps:28 91.30 552 53.37 0.0 Probable E3 ubiquitin-protein ligase ARI5 OS Arabidopsis thaliana GN ARI5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W468|ARI8_ARATH 48 516 + 469 Gaps:30 85.89 567 55.03 0.0 Probable E3 ubiquitin-protein ligase ARI8 OS Arabidopsis thaliana GN ARI8 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RR0|ARI7_ARATH 1 517 + 517 Gaps:37 96.80 562 49.45 0.0 Probable E3 ubiquitin-protein ligase ARI7 OS Arabidopsis thaliana GN ARI7 PE 2 SV 1
blastp_uniprot_sprot sp|P0C8K8|ARI6_ARATH 38 519 + 482 Gaps:31 90.40 552 51.90 3e-180 Putative E3 ubiquitin-protein ligase ARI6 OS Arabidopsis thaliana GN ARI6 PE 5 SV 1
blastp_uniprot_sprot sp|Q9SKC3|ARI9_ARATH 33 498 + 466 Gaps:26 89.50 543 49.79 3e-168 Probable E3 ubiquitin-protein ligase ARI9 OS Arabidopsis thaliana GN ARI9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC2|ARI11_ARATH 49 515 + 467 Gaps:20 88.75 542 48.86 5e-163 Probable E3 ubiquitin-protein ligase ARI11 OS Arabidopsis thaliana GN ARI11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKC4|ARI10_ARATH 50 516 + 467 Gaps:22 92.02 514 48.84 2e-158 Probable E3 ubiquitin-protein ligase ARI10 OS Arabidopsis thaliana GN ARI10 PE 2 SV 1
blastp_uniprot_sprot sp|Q84RQ9|ARI12_ARATH 25 497 + 473 Gaps:50 95.77 496 36.42 3e-79 Probable E3 ubiquitin-protein ligase ARI12 OS Arabidopsis thaliana GN ARI12 PE 2 SV 2
blastp_uniprot_sprot sp|Q6T486|RBRA_DICDI 4 494 + 491 Gaps:47 98.08 520 31.37 8e-73 Probable E3 ubiquitin-protein ligase rbrA OS Dictyostelium discoideum GN rbrA PE 3 SV 1
blastp_uniprot_sprot sp|Q9P3U4|YKX2_SCHPO 39 491 + 453 Gaps:38 90.67 504 31.07 1e-61 Uncharacterized RING finger protein C328.02 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC328.02 PE 3 SV 1
rpsblast_cdd gnl|CDD|128895 203 267 + 65 Gaps:3 100.00 64 42.19 4e-13 smart00647 IBR In Between Ring fingers. the domains occurs between pairs og RING fingers.
rpsblast_cdd gnl|CDD|201821 203 267 + 65 Gaps:2 100.00 63 34.92 1e-09 pfam01485 IBR IBR domain. The IBR (In Between Ring fingers) domain is often found to occur between pairs of ring fingers (pfam00097). This domain has also been called the C6HC domain and DRIL (for double RING finger linked) domain. Proteins that contain two Ring fingers and an IBR domain (these proteins are also termed RBR family proteins) are thought to exist in all eukaryotic organisms. RBR family members play roles in protein quality control and can indirectly regulate transcription. Evidence suggests that RBR proteins are often parts of cullin-containing ubiquitin ligase complexes. The ubiquitin ligase Parkin is an RBR family protein whose mutations are involved in forms of familial Parkinson's disease.
rpsblast_kog gnl|CDD|37026 56 499 + 444 Gaps:32 99.55 444 38.24 4e-91 KOG1815 KOG1815 KOG1815 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37023 133 338 + 206 Gaps:10 53.12 384 28.43 1e-29 KOG1812 KOG1812 KOG1812 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|37025 134 324 + 191 Gaps:33 48.09 445 25.23 3e-18 KOG1814 KOG1814 KOG1814 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35230 132 330 + 199 Gaps:29 48.43 446 25.00 4e-11 KOG0006 KOG0006 KOG0006 E3 ubiquitin-protein ligase (Parkin protein) [Posttranslational modification protein turnover chaperones].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 285 331 47 PF01485 none IBR domain IPR002867
Pfam 203 267 65 PF01485 none IBR domain IPR002867
SUPERFAMILY 286 333 48 SSF57850 none none none
ProSitePatterns 316 325 10 PS00518 none Zinc finger RING-type signature. IPR017907
PANTHER 3 519 517 PTHR11685 "UniPathway:UPA00143";signature_desc=RBR FAMILY (RING FINGER AND IBR DOMAIN-CONTAINING) none IPR031127
SMART 271 336 66 SM00647 none In Between Ring fingers IPR002867
SMART 203 267 65 SM00647 none In Between Ring fingers IPR002867
SUPERFAMILY 203 274 72 SSF57850 none none none
PANTHER 3 519 517 PTHR11685:SF10 none none none
SUPERFAMILY 131 216 86 SSF57850 none none none
Gene3D 131 191 61 G3DSA:3.30.40.10 none none IPR013083
ProSiteProfiles 134 183 50 PS50089 none Zinc finger RING-type profile. IPR001841

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting