Protein : Qrob_P0104460.2 Q. robur
Protein Identifier  ? Qrob_P0104460.2 Organism . Name  Quercus robur
Score  25.0 Score Type  egn
Protein Description  (M=1) K08906 - cytochrome c6 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 126  
Kegg Orthology  K08906
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0020037 heme binding Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.
GO:0009055 electron carrier activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250897 1 125 + 125 none 74.85 167 88.00 6e-77 cytochrome c6 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0015s15410g 1 125 + 125 none 59.81 209 85.60 2e-75 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa013384mg 2 124 + 123 none 97.62 126 83.74 6e-73 hypothetical protein
blastp_kegg lcl|cit:102625860 1 125 + 125 none 71.84 174 78.40 2e-72 cytochrome c6 chloroplastic-like
blastp_kegg lcl|tcc:TCM_029387 1 125 + 125 Gaps:1 72.09 172 81.45 2e-71 Cytochrome c
blastp_kegg lcl|eus:EUTSA_v10001050mg 2 123 + 122 none 70.11 174 82.79 3e-71 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10017084mg 1 125 + 125 none 85.03 147 76.80 9e-71 hypothetical protein
blastp_kegg lcl|mtr:MTR_4g083990 2 124 + 123 none 71.10 173 78.86 2e-70 Cytochrome c6
blastp_kegg lcl|ath:AT5G45040 2 123 + 122 none 69.71 175 81.15 3e-70 cytochrome c6
blastp_kegg lcl|pvu:PHAVU_002G098700g 1 124 + 124 none 72.09 172 76.61 5e-70 hypothetical protein
blastp_pdb 2dge_D 19 123 + 105 none 100.00 105 84.76 5e-64 mol:protein length:105 Cytochrome c6
blastp_pdb 2dge_C 19 123 + 105 none 100.00 105 84.76 5e-64 mol:protein length:105 Cytochrome c6
blastp_pdb 2dge_B 19 123 + 105 none 100.00 105 84.76 5e-64 mol:protein length:105 Cytochrome c6
blastp_pdb 2dge_A 19 123 + 105 none 100.00 105 84.76 5e-64 mol:protein length:105 Cytochrome c6
blastp_pdb 2ce1_A 19 123 + 105 none 100.00 105 82.86 1e-62 mol:protein length:105 CYTOCHROME C6
blastp_pdb 2ce0_A 19 123 + 105 none 100.00 105 82.86 1e-62 mol:protein length:105 CYTOCHROME C6
blastp_pdb 2v07_A 19 123 + 105 none 100.00 105 82.86 2e-62 mol:protein length:105 CYTOCHROME C6
blastp_pdb 1gdv_A 22 117 + 96 Gaps:12 98.82 85 38.10 3e-11 mol:protein length:85 CYTOCHROME C6
blastp_pdb 1c6s_A 22 118 + 97 Gaps:12 97.70 87 36.47 7e-11 mol:protein length:87 CYTOCHROME C6
blastp_pdb 2zbo_K 22 117 + 96 Gaps:14 97.67 86 38.10 5e-10 mol:protein length:86 Cytochrome c6
blastp_uniprot_sprot sp|Q93VA3|CYC6_ARATH 2 123 + 122 none 69.71 175 81.15 1e-71 Cytochrome c6 chloroplastic OS Arabidopsis thaliana GN petJ PE 1 SV 1
blastp_uniprot_sprot sp|P00112|CYC6_MICAE 26 117 + 92 Gaps:12 98.77 81 42.50 5e-13 Cytochrome c6 OS Microcystis aeruginosa GN petJ PE 1 SV 2
blastp_uniprot_sprot sp|P00109|CYC6_ALAES 21 117 + 97 Gaps:14 98.84 86 43.53 2e-12 Cytochrome c6 OS Alaria esculenta GN petJ PE 1 SV 1
blastp_uniprot_sprot sp|P00108|CYC6_PETFA 21 117 + 97 Gaps:14 100.00 85 42.35 3e-12 Cytochrome c6 OS Petalonia fascia GN petJ PE 1 SV 1
blastp_uniprot_sprot sp|P00110|CYC6_BUMFI 22 117 + 96 Gaps:14 97.67 86 41.67 3e-12 Cytochrome c6 OS Bumilleriopsis filiformis GN petJ PE 1 SV 1
blastp_uniprot_sprot sp|Q6B941|CYC6_GRATL 1 117 + 117 Gaps:15 100.00 108 35.19 5e-12 Cytochrome c6 OS Gracilaria tenuistipitata var. liui GN petJ PE 3 SV 1
blastp_uniprot_sprot sp|P00116|CYC6_APHFL 22 118 + 97 Gaps:12 97.70 87 38.82 1e-11 Cytochrome c6 OS Aphanizomenon flos-aquae GN petJ PE 1 SV 1
blastp_uniprot_sprot sp|P07497|CYC6_SYNP6 1 117 + 117 Gaps:16 90.99 111 35.64 3e-11 Cytochrome c6 OS Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN petJ PE 1 SV 2
blastp_uniprot_sprot sp|P25935|CYC6_SYNE7 1 117 + 117 Gaps:16 90.99 111 35.64 3e-11 Cytochrome c6 OS Synechococcus elongatus (strain PCC 7942) GN petJ PE 3 SV 1
blastp_uniprot_sprot sp|P00114|CYC6_SYNLI 22 118 + 97 Gaps:12 97.70 87 36.47 5e-11 Cytochrome c6 OS Synechococcus lividus GN petJ PE 1 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 22 87 66 PF13442 none Cytochrome C oxidase, cbb3-type, subunit III IPR009056
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 20 119 100 SSF46626 none none IPR009056
Phobius 19 125 107 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 22 121 100 G3DSA:1.10.760.10 none none IPR009056
ProSiteProfiles 21 113 93 PS51007 none Cytochrome c family profile. IPR009056

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting