Protein : Qrob_P0103150.2 Q. robur
Protein Identifier  ? Qrob_P0103150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K01872 - alanyl-tRNA synthetase [EC:6.1.1.7] Code Enzyme  EC:6.1.1.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 455  
Kegg Orthology  K01872
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004813 alanine-tRNA ligase activity Catalysis of the reaction: ATP + L-alanine + tRNA(Ala) = AMP + diphosphate + L-alanyl-tRNA(Ala).
GO:0006419 alanyl-tRNA aminoacylation The process of coupling alanine to alanyl-tRNA, catalyzed by alanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0036070 4 453 + 450 Gaps:37 47.51 1025 83.57 0.0 alanyl-tRNA synthetase putative (EC:6.1.1.7)
blastp_kegg lcl|cic:CICLE_v10030624mg 4 453 + 450 Gaps:37 48.65 1001 82.75 0.0 hypothetical protein
blastp_kegg lcl|cit:102622589 4 453 + 450 Gaps:37 48.27 1009 82.55 0.0 alanine--tRNA ligase-like
blastp_kegg lcl|vvi:100249161 4 453 + 450 Gaps:37 48.60 1002 82.34 0.0 alanyl-tRNA synthetase-like
blastp_kegg lcl|csv:101222905 4 453 + 450 Gaps:37 50.94 956 81.93 0.0 alanine--tRNA ligase-like
blastp_kegg lcl|pop:POPTR_0005s09710g 4 453 + 450 Gaps:46 51.29 967 81.25 0.0 POPTRDRAFT_558710 alanyl-tRNA synthetase family protein
blastp_kegg lcl|fve:101294552 4 453 + 450 Gaps:37 48.60 1002 81.11 0.0 alanine--tRNA ligase-like
blastp_kegg lcl|tcc:TCM_007751 4 453 + 450 Gaps:37 47.98 1015 80.49 0.0 Alanyl-tRNA synthetase putative
blastp_kegg lcl|pmum:103321062 1 451 + 451 Gaps:37 47.61 1025 81.97 0.0 alanine--tRNA ligase
blastp_kegg lcl|pxb:103943199 4 451 + 448 Gaps:37 50.95 952 80.62 0.0 alanine--tRNA ligase
blastp_pdb 3hxy_A 10 416 + 407 Gaps:77 97.96 441 44.44 1e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hxx_A 10 416 + 407 Gaps:77 97.96 441 44.44 1e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hxw_A 10 416 + 407 Gaps:77 97.96 441 44.44 1e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hxv_A 10 416 + 407 Gaps:77 97.96 441 44.44 1e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hxu_A 10 416 + 407 Gaps:77 97.96 441 44.44 1e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hy1_B 10 416 + 407 Gaps:77 97.96 441 43.98 8e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hy1_A 10 416 + 407 Gaps:77 97.96 441 43.98 8e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hy0_B 10 416 + 407 Gaps:77 97.96 441 43.98 8e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hy0_A 10 416 + 407 Gaps:77 97.96 441 43.98 8e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_pdb 3hxz_D 10 416 + 407 Gaps:77 97.96 441 43.98 8e-110 mol:protein length:441 Alanyl-tRNA synthetase
blastp_uniprot_sprot sp|P36428|SYA_ARATH 4 453 + 450 Gaps:37 48.55 1003 78.85 0.0 Alanine--tRNA ligase OS Arabidopsis thaliana GN ALATS PE 1 SV 3
blastp_uniprot_sprot sp|Q8BGQ7|SYAC_MOUSE 1 451 + 451 Gaps:44 50.52 968 56.24 0.0 Alanine--tRNA ligase cytoplasmic OS Mus musculus GN Aars PE 1 SV 1
blastp_uniprot_sprot sp|P50475|SYAC_RAT 1 451 + 451 Gaps:44 50.52 968 55.83 0.0 Alanine--tRNA ligase cytoplasmic OS Rattus norvegicus GN Aars PE 1 SV 3
blastp_uniprot_sprot sp|Q8CFX8|SYAC_MESAU 1 449 + 449 Gaps:44 50.31 968 56.06 1e-180 Alanine--tRNA ligase cytoplasmic OS Mesocricetus auratus GN Aars PE 2 SV 1
blastp_uniprot_sprot sp|P49588|SYAC_HUMAN 1 449 + 449 Gaps:44 50.31 968 55.85 3e-179 Alanine--tRNA ligase cytoplasmic OS Homo sapiens GN AARS PE 1 SV 2
blastp_uniprot_sprot sp|P21894|SYAC_BOMMO 1 452 + 452 Gaps:44 50.67 967 55.31 1e-178 Alanine--tRNA ligase cytoplasmic OS Bombyx mori PE 1 SV 1
blastp_uniprot_sprot sp|O01541|SYAC_CAEEL 7 451 + 445 Gaps:48 50.10 968 55.05 1e-178 Alanine--tRNA ligase cytoplasmic OS Caenorhabditis elegans GN aars-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5RC02|SYAC_PONAB 1 449 + 449 Gaps:44 50.31 968 55.65 1e-178 Alanine--tRNA ligase cytoplasmic OS Pongo abelii GN AARS PE 2 SV 1
blastp_uniprot_sprot sp|Q9VLM8|SYAC_DROME 7 454 + 448 Gaps:44 50.31 966 55.35 7e-178 Alanine--tRNA ligase cytoplasmic OS Drosophila melanogaster GN Aats-ala PE 2 SV 1
blastp_uniprot_sprot sp|P40825|SYA_YEAST 3 449 + 447 Gaps:42 49.75 983 53.78 9e-178 Alanine--tRNA ligase mitochondrial OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ALA1 PE 1 SV 3

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 399 420 22 Coil none none none
Gene3D 89 216 128 G3DSA:3.30.930.10 none none none
Gene3D 5 88 84 G3DSA:3.30.930.10 none none none
PRINTS 201 214 14 PR00980 "KEGG:00970+6.1.1.7","Reactome:REACT_71" Alanyl-tRNA synthetase signature IPR002318
PRINTS 282 295 14 PR00980 "KEGG:00970+6.1.1.7","Reactome:REACT_71" Alanyl-tRNA synthetase signature IPR002318
PRINTS 83 94 12 PR00980 "KEGG:00970+6.1.1.7","Reactome:REACT_71" Alanyl-tRNA synthetase signature IPR002318
PRINTS 174 185 12 PR00980 "KEGG:00970+6.1.1.7","Reactome:REACT_71" Alanyl-tRNA synthetase signature IPR002318
PRINTS 258 274 17 PR00980 "KEGG:00970+6.1.1.7","Reactome:REACT_71" Alanyl-tRNA synthetase signature IPR002318
ProSiteProfiles 5 454 450 PS50860 "KEGG:00970+6.1.1.7" Alanyl-transfer RNA synthetases family profile. IPR018165
PANTHER 1 453 453 PTHR11777 none none none
Pfam 88 438 351 PF01411 "KEGG:00970+6.1.1.7" tRNA synthetases class II (A) IPR018164
SUPERFAMILY 221 421 201 SSF101353 "KEGG:00970+6.1.1.7","Reactome:REACT_71" none IPR018162
SUPERFAMILY 6 220 215 SSF55681 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting