Protein : Qrob_P0102790.2 Q. robur
Protein Identifier  ? Qrob_P0102790.2 Organism . Name  Quercus robur
Score  6.2 Score Type  egn
Protein Description  (M=3) K12489 - Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 417  
Kegg Orthology  K12489
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005096 GTPase activator activity Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0814510 6 416 + 411 Gaps:2 52.03 790 75.91 0.0 gcn4-complementing protein putative
blastp_kegg lcl|pmum:103321045 6 416 + 411 Gaps:3 52.03 788 76.59 0.0 ADP-ribosylation factor GTPase-activating protein AGD2-like
blastp_kegg lcl|fve:101298885 6 415 + 410 Gaps:6 51.85 783 76.60 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_kegg lcl|tcc:TCM_011296 6 416 + 411 Gaps:9 51.60 783 78.47 0.0 Gcn4-complementing protein putative isoform 1
blastp_kegg lcl|pper:PRUPE_ppa001640mg 6 416 + 411 Gaps:3 52.03 788 75.85 0.0 hypothetical protein
blastp_kegg lcl|pxb:103943183 6 416 + 411 Gaps:4 52.03 790 75.91 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_kegg lcl|mdm:103403422 6 416 + 411 Gaps:4 52.76 779 75.91 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_kegg lcl|mdm:103414358 6 416 + 411 Gaps:3 62.61 658 74.51 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_kegg lcl|gmx:100796740 6 416 + 411 Gaps:3 53.35 776 74.40 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_kegg lcl|gmx:100796006 6 416 + 411 Gaps:3 53.35 776 74.15 0.0 ADP-ribosylation factor GTPase-activating protein AGD4-like
blastp_pdb 3jue_B 330 407 + 78 Gaps:2 20.65 368 56.58 3e-22 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 3jue_A 330 407 + 78 Gaps:2 20.65 368 56.58 3e-22 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 1dcq_A 333 414 + 82 Gaps:2 28.78 278 52.50 6e-19 mol:protein length:278 PYK2-ASSOCIATED PROTEIN BETA
blastp_pdb 2iqj_B 336 410 + 75 Gaps:2 54.48 134 46.58 1e-17 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2iqj_A 336 410 + 75 Gaps:2 54.48 134 46.58 1e-17 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2crr_A 336 400 + 65 Gaps:2 44.68 141 49.21 4e-16 mol:protein length:141 Stromal membrane-associated protein SMAP1B
blastp_pdb 2b0o_H 334 410 + 77 Gaps:2 24.92 301 52.00 8e-16 mol:protein length:301 UPLC1
blastp_pdb 2b0o_G 334 410 + 77 Gaps:2 24.92 301 52.00 8e-16 mol:protein length:301 UPLC1
blastp_pdb 2b0o_F 334 410 + 77 Gaps:2 24.92 301 52.00 8e-16 mol:protein length:301 UPLC1
blastp_pdb 2b0o_E 334 410 + 77 Gaps:2 24.92 301 52.00 8e-16 mol:protein length:301 UPLC1
blastp_uniprot_sprot sp|Q9SMX5|AGD4_ARATH 6 415 + 410 Gaps:9 51.74 775 66.33 0.0 ADP-ribosylation factor GTPase-activating protein AGD4 OS Arabidopsis thaliana GN AGD4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C6C3|AGD2_ARATH 6 410 + 405 Gaps:13 51.03 776 65.66 8e-175 ADP-ribosylation factor GTPase-activating protein AGD2 OS Arabidopsis thaliana GN AGD2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5W7F2|AGD3_ARATH 6 410 + 405 Gaps:34 52.12 827 52.44 1e-139 ADP-ribosylation factor GTPase-activating protein AGD3 OS Arabidopsis thaliana GN AGD3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FIT8|AGD1_ARATH 6 410 + 405 Gaps:37 51.69 828 50.47 3e-127 ADP-ribosylation factor GTPase-activating protein AGD1 OS Arabidopsis thaliana GN AGD1 PE 2 SV 2
blastp_uniprot_sprot sp|Q5FVC7|ACAP2_RAT 7 410 + 404 Gaps:95 42.21 770 36.31 2e-42 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Rattus norvegicus GN Acap2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6ZQK5|ACAP2_MOUSE 7 410 + 404 Gaps:95 42.21 770 36.00 6e-42 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Mus musculus GN Acap2 PE 1 SV 2
blastp_uniprot_sprot sp|Q96P50|ACAP3_HUMAN 10 408 + 399 Gaps:105 39.09 834 34.97 2e-41 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 3 OS Homo sapiens GN ACAP3 PE 1 SV 2
blastp_uniprot_sprot sp|Q15057|ACAP2_HUMAN 7 408 + 402 Gaps:95 41.52 778 35.91 2e-41 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Homo sapiens GN ACAP2 PE 1 SV 3
blastp_uniprot_sprot sp|Q6IVG4|ACAP2_RABIT 7 408 + 402 Gaps:95 41.52 778 35.60 4e-41 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Oryctolagus cuniculus GN ACAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5ZK62|ACAP2_CHICK 7 410 + 404 Gaps:79 41.61 781 34.15 6e-41 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Gallus gallus GN ACAP2 PE 2 SV 1

26 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 6 90 85 SSF103657 none none none
SUPERFAMILY 138 163 26 SSF103657 none none none
PANTHER 6 103 98 PTHR23180:SF209 none none none
ProSiteProfiles 140 274 135 PS50003 none PH domain profile. IPR001849
PANTHER 319 410 92 PTHR23180 none none none
SMART 141 276 136 SM00233 none Pleckstrin homology domain. IPR001849
Coils 76 97 22 Coil none none none
PANTHER 123 174 52 PTHR23180:SF209 none none none
PANTHER 319 410 92 PTHR23180:SF209 none none none
Gene3D 215 279 65 G3DSA:2.30.29.30 none none IPR011993
Gene3D 140 180 41 G3DSA:2.30.29.30 none none IPR011993
SMART 324 416 93 SM00105 none Putative GTP-ase activating proteins for the small GTPase, ARF IPR001164
ProSiteProfiles 324 416 93 PS50115 none ARF GTPase-activating proteins domain profile. IPR001164
Pfam 142 272 131 PF00169 none PH domain IPR001849
PANTHER 213 279 67 PTHR23180:SF209 none none none
PANTHER 213 279 67 PTHR23180 none none none
PANTHER 6 103 98 PTHR23180 none none none
PANTHER 123 174 52 PTHR23180 none none none
Pfam 329 408 80 PF01412 none Putative GTPase activating protein for Arf IPR001164
SUPERFAMILY 133 181 49 SSF50729 none none none
SUPERFAMILY 219 288 70 SSF50729 none none none
Gene3D 6 75 70 G3DSA:1.20.1270.60 none none IPR027267
SUPERFAMILY 327 410 84 SSF57863 none none none
PRINTS 378 399 22 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 355 372 18 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 336 355 20 PR00405 none HIV Rev interacting protein signature IPR001164

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting