4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0020037 | heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
GO:0055114 | oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
GO:0004601 | peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. |
GO:0006979 | response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. |
36 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pxb:103938167 | 1 | 347 | + | 347 | Gaps:6 | 99.72 | 354 | 76.49 | 0.0 | peroxidase 19 |
blastp_kegg | lcl|rcu:RCOM_1012870 | 14 | 348 | + | 335 | Gaps:4 | 92.88 | 365 | 77.58 | 0.0 | Peroxidase 19 precursor putative (EC:1.11.1.7) |
blastp_kegg | lcl|mdm:103434853 | 14 | 347 | + | 334 | Gaps:6 | 96.32 | 353 | 77.35 | 0.0 | peroxidase 19 |
blastp_kegg | lcl|tcc:TCM_029767 | 1 | 347 | + | 347 | Gaps:10 | 100.00 | 347 | 76.95 | 0.0 | Peroxidase 19 putative isoform 1 |
blastp_kegg | lcl|fve:101307278 | 17 | 347 | + | 331 | Gaps:4 | 95.34 | 343 | 80.43 | 0.0 | peroxidase 19-like |
blastp_kegg | lcl|pop:POPTR_0004s05140g | 19 | 346 | + | 328 | Gaps:3 | 95.94 | 345 | 77.34 | 0.0 | POPTRDRAFT_1075363 hypothetical protein |
blastp_kegg | lcl|pmum:103324848 | 29 | 347 | + | 319 | Gaps:1 | 90.65 | 353 | 81.25 | 0.0 | peroxidase 19 |
blastp_kegg | lcl|cit:102620960 | 14 | 347 | + | 334 | Gaps:7 | 82.08 | 413 | 76.99 | 0.0 | peroxidase 19-like |
blastp_kegg | lcl|cic:CICLE_v10017786mg | 20 | 347 | + | 328 | Gaps:6 | 93.82 | 356 | 77.25 | 0.0 | hypothetical protein |
blastp_kegg | lcl|pper:PRUPE_ppa017084mg | 29 | 347 | + | 319 | Gaps:1 | 90.65 | 353 | 81.25 | 0.0 | hypothetical protein |
blastp_pdb | 3hdl_A | 43 | 345 | + | 303 | Gaps:7 | 98.68 | 304 | 41.00 | 9e-70 | mol:protein length:304 Royal Palm Tree Peroxidase |
blastp_pdb | 1qgj_B | 42 | 343 | + | 302 | Gaps:15 | 98.33 | 300 | 43.05 | 1e-69 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1qgj_A | 42 | 343 | + | 302 | Gaps:15 | 98.33 | 300 | 43.05 | 1e-69 | mol:protein length:300 PEROXIDASE N |
blastp_pdb | 1qo4_A | 41 | 343 | + | 303 | Gaps:7 | 98.04 | 306 | 39.33 | 3e-67 | mol:protein length:306 PEROXIDASE |
blastp_pdb | 1pa2_A | 41 | 343 | + | 303 | Gaps:7 | 98.04 | 306 | 39.33 | 3e-67 | mol:protein length:306 PEROXIDASE |
blastp_pdb | 1gx2_B | 41 | 343 | + | 303 | Gaps:9 | 97.73 | 309 | 39.07 | 6e-67 | mol:protein length:309 PEROXIDASE C1A |
blastp_pdb | 1gx2_A | 41 | 343 | + | 303 | Gaps:9 | 97.73 | 309 | 39.07 | 6e-67 | mol:protein length:309 PEROXIDASE C1A |
blastp_pdb | 1sch_B | 42 | 343 | + | 302 | Gaps:12 | 98.64 | 294 | 42.76 | 8e-67 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1sch_A | 42 | 343 | + | 302 | Gaps:12 | 98.64 | 294 | 42.76 | 8e-67 | mol:protein length:294 PEANUT PEROXIDASE MAJOR CATIONIC ISOZYME |
blastp_pdb | 1gwo_A | 41 | 343 | + | 303 | Gaps:9 | 97.73 | 309 | 39.07 | 1e-66 | mol:protein length:309 PEROXIDASE C1A |
blastp_uniprot_sprot | sp|O22959|PER19_ARATH | 22 | 347 | + | 326 | Gaps:10 | 97.11 | 346 | 64.29 | 6e-161 | Peroxidase 19 OS Arabidopsis thaliana GN PER19 PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q96509|PER55_ARATH | 42 | 344 | + | 303 | Gaps:6 | 90.00 | 330 | 47.14 | 4e-91 | Peroxidase 55 OS Arabidopsis thaliana GN PER55 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9SZE7|PER51_ARATH | 39 | 343 | + | 305 | Gaps:10 | 92.10 | 329 | 44.55 | 3e-84 | Peroxidase 51 OS Arabidopsis thaliana GN PER51 PE 2 SV 1 |
blastp_uniprot_sprot | sp|O23609|PER41_ARATH | 34 | 343 | + | 310 | Gaps:12 | 91.41 | 326 | 44.97 | 5e-84 | Peroxidase 41 OS Arabidopsis thaliana GN PER41 PE 3 SV 1 |
blastp_uniprot_sprot | sp|Q9FJR1|PER65_ARATH | 45 | 343 | + | 299 | Gaps:9 | 87.43 | 334 | 46.58 | 7e-84 | Peroxidase 65 OS Arabidopsis thaliana GN PER65 PE 2 SV 2 |
blastp_uniprot_sprot | sp|Q43873|PER73_ARATH | 19 | 343 | + | 325 | Gaps:9 | 97.26 | 329 | 42.81 | 9e-84 | Peroxidase 73 OS Arabidopsis thaliana GN PER73 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q96510|PER35_ARATH | 13 | 343 | + | 331 | Gaps:14 | 98.78 | 329 | 42.77 | 2e-82 | Peroxidase 35 OS Arabidopsis thaliana GN PER35 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q43731|PER50_ARATH | 42 | 343 | + | 302 | Gaps:10 | 91.19 | 329 | 43.67 | 4e-82 | Peroxidase 50 OS Arabidopsis thaliana GN PER50 PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q96518|PER16_ARATH | 20 | 344 | + | 325 | Gaps:17 | 96.59 | 323 | 42.31 | 2e-80 | Peroxidase 16 OS Arabidopsis thaliana GN PER16 PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q96522|PER45_ARATH | 42 | 344 | + | 303 | Gaps:10 | 91.38 | 325 | 43.77 | 3e-79 | Peroxidase 45 OS Arabidopsis thaliana GN PER45 PE 1 SV 1 |
28 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Pfam | 64 | 310 | 247 | PF00141 | none | Peroxidase | IPR002016 |
Gene3D | 198 | 325 | 128 | G3DSA:1.10.420.10 | none | none | none |
Gene3D | 50 | 197 | 148 | G3DSA:1.10.520.10 | none | none | none |
PRINTS | 266 | 281 | 16 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 74 | 88 | 15 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 157 | 169 | 13 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 205 | 220 | 16 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
PRINTS | 139 | 156 | 18 | PR00458 | none | Haem peroxidase superfamily signature | IPR002016 |
Phobius | 35 | 348 | 314 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
ProSiteProfiles | 42 | 347 | 306 | PS50873 | none | Plant heme peroxidase family profile. | IPR002016 |
ProSitePatterns | 74 | 85 | 12 | PS00436 | none | Peroxidases active site signature. | IPR019794 |
ProSitePatterns | 205 | 215 | 11 | PS00435 | none | Peroxidases proximal heme-ligand signature. | IPR019793 |
Phobius | 1 | 34 | 34 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
PRINTS | 264 | 279 | 16 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 280 | 297 | 18 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 204 | 216 | 13 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 138 | 148 | 11 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 320 | 333 | 14 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 157 | 172 | 16 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 76 | 96 | 21 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 119 | 132 | 14 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PRINTS | 52 | 71 | 20 | PR00461 | "KEGG:00360+1.11.1.7","KEGG:00940+1.11.1.7","MetaCyc:PWY-5461","MetaCyc:PWY-7214","MetaCyc:PWY-7445" | Plant peroxidase signature | IPR000823 |
PANTHER | 44 | 343 | 300 | PTHR31235 | none | none | none |
Phobius | 1 | 13 | 13 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
Phobius | 26 | 34 | 9 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
SUPERFAMILY | 42 | 345 | 304 | SSF48113 | none | none | IPR010255 |
Phobius | 14 | 25 | 12 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
PANTHER | 44 | 343 | 300 | PTHR31235:SF10 | none | none | none |
3 Localization
Analysis | Start | End | Length |
---|---|---|---|
TMHMM | 10 | 32 | 22 |
SignalP_GRAM_POSITIVE | 1 | 34 | 33 |
SignalP_EUK | 1 | 34 | 33 |
1 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |