Protein : Qrob_P0099880.2 Q. robur
Protein Identifier  ? Qrob_P0099880.2 Organism . Name  Quercus robur
Score  83.0 Score Type  egn
Protein Description  (M=1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN (PTHR31375:SF11) Code Enzyme  EC:3.2.1.67
Gene Prediction Quality  validated Protein length 

Sequence

Length: 421  
Kegg Orthology  K01213
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004650 polygalacturonase activity Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_007591 7 420 + 414 Gaps:16 98.83 429 75.47 0.0 Pectin lyase-like superfamily protein isoform 1
blastp_kegg lcl|pmum:103334716 1 420 + 420 Gaps:23 75.32 551 74.94 0.0 exopolygalacturonase
blastp_kegg lcl|pper:PRUPE_ppa019563mg 45 420 + 376 Gaps:10 98.19 387 78.16 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s17010g 15 420 + 406 Gaps:12 96.42 419 76.49 0.0 POPTRDRAFT_875430 hypothetical protein
blastp_kegg lcl|vvi:100243609 9 420 + 412 Gaps:16 98.11 424 74.28 0.0 exopolygalacturonase-like
blastp_kegg lcl|mdm:103421079 2 420 + 419 Gaps:20 99.05 421 72.42 0.0 exopolygalacturonase-like
blastp_kegg lcl|mdm:103421078 2 420 + 419 Gaps:20 99.05 421 72.42 0.0 exopolygalacturonase-like
blastp_kegg lcl|pxb:103926718 2 420 + 419 Gaps:21 99.05 420 73.08 0.0 exopolygalacturonase-like
blastp_kegg lcl|cit:102610721 9 420 + 412 Gaps:26 98.32 417 75.12 0.0 exopolygalacturonase-like
blastp_kegg lcl|mdm:103440957 2 420 + 419 Gaps:20 99.05 421 72.18 0.0 exopolygalacturonase-like
blastp_pdb 1bhe_A 144 409 + 266 Gaps:37 69.41 376 33.72 2e-22 mol:protein length:376 POLYGALACTURONASE
blastp_pdb 1nhc_F 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_E 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_D 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_C 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_B 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1nhc_A 140 406 + 267 Gaps:20 77.08 336 31.27 2e-20 mol:protein length:336 Polygalacturonase I
blastp_pdb 1ib4_B 92 406 + 315 Gaps:42 89.97 339 30.82 7e-17 mol:protein length:339 POLYGALACTURONASE
blastp_pdb 1ib4_A 92 406 + 315 Gaps:42 89.97 339 30.82 7e-17 mol:protein length:339 POLYGALACTURONASE
blastp_pdb 1ia5_A 92 406 + 315 Gaps:42 89.97 339 30.82 7e-17 mol:protein length:339 POLYGALACTURONASE
blastp_uniprot_sprot sp|Q6H9K0|PGLR2_PLAAC 58 416 + 359 Gaps:12 96.29 377 49.59 2e-121 Exopolygalacturonase (Fragment) OS Platanus acerifolia GN plaa2 PE 1 SV 1
blastp_uniprot_sprot sp|P35339|PGLR3_MAIZE 58 412 + 355 Gaps:7 88.29 410 45.30 5e-110 Exopolygalacturonase OS Zea mays GN PG2C PE 2 SV 1
blastp_uniprot_sprot sp|P35338|PGLR2_MAIZE 58 412 + 355 Gaps:7 88.29 410 44.20 4e-109 Exopolygalacturonase OS Zea mays GN PG9 PE 2 SV 1
blastp_uniprot_sprot sp|P26216|PGLR1_MAIZE 58 412 + 355 Gaps:7 88.29 410 44.20 7e-109 Exopolygalacturonase OS Zea mays GN PG1 PE 1 SV 1
blastp_uniprot_sprot sp|P24548|PGLR_OENOR 72 420 + 349 Gaps:12 98.07 362 47.61 1e-108 Exopolygalacturonase (Fragment) OS Oenothera organensis PE 2 SV 1
blastp_uniprot_sprot sp|Q05967|PGLR_TOBAC 45 420 + 376 Gaps:18 94.44 396 44.65 2e-106 Polygalacturonase OS Nicotiana tabacum GN PG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q39766|PGLR_GOSBA 58 420 + 363 Gaps:11 90.42 407 45.65 3e-106 Polygalacturonase OS Gossypium barbadense GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|Q39786|PGLR_GOSHI 50 420 + 371 Gaps:11 91.89 407 44.92 2e-105 Polygalacturonase OS Gossypium hirsutum GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|P49063|PGLR2_ARATH 58 420 + 363 Gaps:11 82.88 444 45.65 7e-102 Exopolygalacturonase clone GBGA483 OS Arabidopsis thaliana GN At3g07850 PE 2 SV 2
blastp_uniprot_sprot sp|P35337|PGLR_BRANA 63 419 + 357 Gaps:9 91.18 397 43.65 2e-98 Polygalacturonase OS Brassica napus PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 85 409 325 PF00295 none Glycosyl hydrolases family 28 IPR000743
Phobius 10 19 10 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 58 419 362 PTHR31375:SF11 none none none
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 58 419 362 G3DSA:2.160.20.10 none none IPR012334
ProSitePatterns 259 272 14 PS00502 none Polygalacturonase active site. IPR000743
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 25 420 396 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 282 303 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 252 272 21 SM00710 none Parallel beta-helix repeats IPR006626
SMART 229 250 22 SM00710 none Parallel beta-helix repeats IPR006626
SMART 347 374 28 SM00710 none Parallel beta-helix repeats IPR006626
SMART 313 334 22 SM00710 none Parallel beta-helix repeats IPR006626
SUPERFAMILY 54 419 366 SSF51126 none none IPR011050
PANTHER 58 419 362 PTHR31375 none none none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_EUK 1 24 23

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 24   Secretory pathway 1 0.903 0.077 NON-PLANT 24