Protein : Qrob_P0098460.2 Q. robur
Protein Identifier  ? Qrob_P0098460.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR19139:SF128 - AQUAPORIN SIP2-1-RELATED (PTHR19139:SF128) Alias (in v1)  Qrob_P0815700.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 238  
Kegg Orthology  K09875
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103932800 1 237 + 237 Gaps:1 100.00 236 76.69 1e-128 probable aquaporin SIP2-1
blastp_kegg lcl|pmum:103342259 1 237 + 237 Gaps:1 100.00 236 76.69 4e-127 probable aquaporin SIP2-1
blastp_kegg lcl|pxb:103939267 1 237 + 237 Gaps:1 100.00 236 76.27 6e-127 probable aquaporin SIP2-1
blastp_kegg lcl|pper:PRUPE_ppa010798mg 1 237 + 237 Gaps:1 100.00 236 76.69 6e-127 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10012628mg 1 237 + 237 Gaps:1 100.00 236 75.42 2e-126 hypothetical protein
blastp_kegg lcl|mdm:103401138 1 237 + 237 Gaps:1 94.40 250 76.27 2e-126 probable aquaporin SIP2-1
blastp_kegg lcl|cit:102612682 1 237 + 237 Gaps:1 100.00 236 75.42 4e-126 probable aquaporin SIP2-1-like
blastp_kegg lcl|mdm:103401304 1 237 + 237 Gaps:1 100.00 236 75.85 2e-125 probable aquaporin SIP2-1
blastp_kegg lcl|mdm:103418322 1 237 + 237 Gaps:1 83.99 281 75.85 7e-125 probable aquaporin SIP2-1
blastp_kegg lcl|tcc:TCM_024145 1 237 + 237 Gaps:1 84.89 278 75.42 1e-123 Aquaporin sip2.1 putative
blastp_uniprot_sprot sp|Q9M1K3|SIP21_ARATH 1 237 + 237 none 100.00 237 62.03 2e-108 Probable aquaporin SIP2-1 OS Arabidopsis thaliana GN SIP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q10M80|SIP21_ORYSJ 6 237 + 232 Gaps:5 94.00 250 51.06 5e-74 Aquaporin SIP2-1 OS Oryza sativa subsp. japonica GN SIP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ATM1|SIP21_MAIZE 6 231 + 226 Gaps:5 91.97 249 51.09 4e-66 Aquaporin SIP2-1 OS Zea mays GN SIP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ATM3|SIP11_MAIZE 35 221 + 187 Gaps:9 79.18 245 37.63 6e-25 Aquaporin SIP1-1 OS Zea mays GN SIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5VR89|SIP11_ORYSJ 47 221 + 175 Gaps:10 73.58 246 39.23 2e-24 Aquaporin SIP1-1 OS Oryza sativa subsp. japonica GN SIP1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ATM2|SIP12_MAIZE 47 219 + 173 Gaps:7 72.43 243 39.20 8e-24 Aquaporin SIP1-2 OS Zea mays GN SIP1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FK43|SIP12_ARATH 1 230 + 230 Gaps:13 100.00 243 27.57 2e-20 Probable aquaporin SIP1-2 OS Arabidopsis thaliana GN SIP1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M8W5|SIP11_ARATH 8 219 + 212 Gaps:6 90.00 240 29.63 9e-19 Aquaporin SIP1-1 OS Arabidopsis thaliana GN SIP1-1 PE 2 SV 1
blastp_uniprot_sprot sp|P08995|NO26_SOYBN 64 236 + 173 Gaps:24 63.10 271 31.58 4e-08 Nodulin-26 OS Glycine max PE 1 SV 2
rpsblast_kog gnl|CDD|35444 7 229 + 223 Gaps:14 93.70 238 23.77 3e-21 KOG0223 KOG0223 KOG0223 Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism].

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 147 166 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 237 237 PTHR19139 none none IPR000425
Phobius 201 222 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 128 146 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 9 232 224 G3DSA:1.20.1080.10 none none IPR023271
Phobius 223 237 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PRINTS 201 221 21 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 161 183 23 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 88 107 20 PR00783 none Major intrinsic protein family signature IPR000425
PRINTS 130 148 19 PR00783 none Major intrinsic protein family signature IPR000425
Phobius 44 62 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SUPERFAMILY 7 230 224 SSF81338 none none IPR023271
Phobius 190 200 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 33 43 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 32 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 167 189 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 63 127 65 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 40 218 179 PF00230 none Major intrinsic protein IPR000425
PANTHER 1 237 237 PTHR19139:SF128 none none none

5 Localization

Analysis Start End Length
TMHMM 41 60 19
TMHMM 15 34 19
TMHMM 168 190 22
TMHMM 200 222 22
TMHMM 133 155 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 1 0.979 0.024 NON-PLANT 25