Protein : Qrob_P0098380.2 Q. robur
Protein Identifier  ? Qrob_P0098380.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) PTHR23070:SF13 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN (PTHR23070:SF13) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 250  
Kegg Orthology  K08900
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10019936mg 90 248 + 159 Gaps:19 36.25 480 64.37 3e-70 hypothetical protein
blastp_kegg lcl|cit:102612235 90 248 + 159 Gaps:19 36.25 480 64.37 3e-70 ATP-dependent zinc metalloprotease YME1 homolog
blastp_kegg lcl|tcc:TCM_005088 89 248 + 160 Gaps:19 36.53 479 65.14 8e-67 P-loop containing nucleoside triphosphate hydrolases superfamily protein
blastp_kegg lcl|mdm:103426333 31 248 + 218 Gaps:25 48.54 480 52.36 9e-65 mitochondrial chaperone BCS1-like
blastp_kegg lcl|pxb:103964250 92 248 + 157 Gaps:19 35.76 481 63.95 9e-65 mitochondrial chaperone BCS1-like
blastp_kegg lcl|pop:POPTR_0014s09780g 81 248 + 168 Gaps:19 37.50 488 59.02 1e-64 POPTRDRAFT_572434 AAA-type ATPase family protein
blastp_kegg lcl|gmx:100776680 91 248 + 158 Gaps:19 37.45 462 62.43 2e-64 uncharacterized LOC100776680
blastp_kegg lcl|mdm:103439389 31 248 + 218 Gaps:23 48.76 482 51.49 2e-64 mitochondrial chaperone BCS1
blastp_kegg lcl|rcu:RCOM_1379730 83 248 + 166 Gaps:19 37.17 487 59.12 4e-64 ATP binding protein putative
blastp_kegg lcl|gmx:100805212 85 248 + 164 Gaps:32 42.48 452 57.81 4e-64 mitochondrial chaperone BCS1-like
blastp_uniprot_sprot sp|Q9P6Q3|BCS1_SCHPO 121 243 + 123 Gaps:14 28.29 449 33.07 2e-13 Probable mitochondrial chaperone bcs1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC644.07 PE 2 SV 1
blastp_uniprot_sprot sp|P32839|BCS1_YEAST 121 241 + 121 Gaps:14 27.41 456 35.20 8e-13 Mitochondrial chaperone BCS1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN BCS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7ZV60|BCS1_DANRE 121 246 + 126 Gaps:19 32.14 420 35.56 1e-11 Mitochondrial chaperone BCS1 OS Danio rerio GN bcs1l PE 2 SV 2
blastp_uniprot_sprot sp|Q54DY9|BCS1B_DICDI 121 246 + 126 Gaps:35 34.28 458 31.85 3e-11 Probable mitochondrial chaperone BCS1-B OS Dictyostelium discoideum GN bcsl1b PE 3 SV 1
blastp_uniprot_sprot sp|Q9Y276|BCS1_HUMAN 121 246 + 126 Gaps:18 31.98 419 33.58 4e-10 Mitochondrial chaperone BCS1 OS Homo sapiens GN BCS1L PE 1 SV 1
blastp_uniprot_sprot sp|Q7ZTL7|BCS1_XENLA 121 246 + 126 Gaps:12 31.98 419 35.07 4e-10 Mitochondrial chaperone BCS1 OS Xenopus laevis GN bcs1l PE 2 SV 1
blastp_uniprot_sprot sp|Q54HY8|BCS1A_DICDI 88 241 + 154 Gaps:45 42.99 421 30.39 5e-10 Probable mitochondrial chaperone BCS1-A OS Dictyostelium discoideum GN bcs1la PE 3 SV 1
blastp_uniprot_sprot sp|Q9CZP5|BCS1_MOUSE 121 246 + 126 Gaps:18 32.06 418 33.58 7e-10 Mitochondrial chaperone BCS1 OS Mus musculus GN Bcs1l PE 1 SV 1
blastp_uniprot_sprot sp|Q5E9H5|BCS1_BOVIN 121 246 + 126 Gaps:18 31.98 419 33.58 7e-10 Mitochondrial chaperone BCS1 OS Bos taurus GN BCS1L PE 2 SV 1
rpsblast_cdd gnl|CDD|200921 125 245 + 121 Gaps:21 99.24 131 26.15 1e-08 pfam00004 AAA ATPase family associated with various cellular activities (AAA). AAA family proteins often perform chaperone-like functions that assist in the assembly operation or disassembly of protein complexes.
rpsblast_cdd gnl|CDD|30812 121 245 + 125 Gaps:31 27.13 494 27.61 1e-07 COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification protein turnover chaperones].
rpsblast_kog gnl|CDD|35962 89 248 + 160 Gaps:33 40.92 457 44.39 4e-45 KOG0743 KOG0743 KOG0743 AAA+-type ATPase [Posttranslational modification protein turnover chaperones].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 125 245 121 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
SUPERFAMILY 85 246 162 SSF52540 none none IPR027417
PANTHER 87 248 162 PTHR23070:SF13 none none none
Phobius 1 59 59 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 120 241 122 G3DSA:3.40.50.300 none none IPR027417
Phobius 84 249 166 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 60 83 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 87 248 162 PTHR23070 none none none
SMART 120 247 128 SM00382 none ATPases associated with a variety of cellular activities IPR003593

1 Localization

Analysis Start End Length
TMHMM 59 81 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 55   Mitochondrion 5 0.275 0.426 NON-PLANT 55