Protein : Qrob_P0098200.2 Q. robur
Protein Identifier  ? Qrob_P0098200.2 Organism . Name  Quercus robur
Score  88.1 Score Type  egn
Protein Description  (M=1) PTHR11743:SF23 - GH26960P-RELATED (PTHR11743:SF23) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 243  
Kegg Orthology  K15040
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005741 mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100787061 4 241 + 238 Gaps:2 97.96 245 54.17 1e-90 mitochondrial outer membrane protein porin 1-like
blastp_kegg lcl|tcc:TCM_013827 4 241 + 238 none 98.76 241 54.20 3e-90 Porin/voltage-dependent anion-selective channel protein putative
blastp_kegg lcl|pvu:PHAVU_003G192600g 4 241 + 238 Gaps:2 97.96 245 53.33 5e-90 hypothetical protein
blastp_kegg lcl|gmx:100805522 4 241 + 238 Gaps:2 97.96 245 53.33 5e-89 mitochondrial outer membrane protein porin 1-like
blastp_kegg lcl|pop:POPTR_0012s07210g 4 241 + 238 Gaps:6 97.99 249 53.28 1e-85 POPTRDRAFT_569990 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa018776mg 2 242 + 241 Gaps:4 99.18 245 51.44 1e-84 hypothetical protein
blastp_kegg lcl|cam:101491711 4 241 + 238 none 97.94 243 48.74 3e-82 mitochondrial outer membrane protein porin of 34 kDa-like
blastp_kegg lcl|pmum:103338418 4 242 + 239 Gaps:5 98.36 244 51.67 5e-82 mitochondrial outer membrane protein porin of 36 kDa-like
blastp_kegg lcl|fve:101314958 4 242 + 239 Gaps:7 96.44 253 53.28 3e-80 mitochondrial outer membrane protein porin of 36 kDa-like
blastp_kegg lcl|mdm:103422842 5 242 + 238 Gaps:6 97.94 243 53.36 8e-80 mitochondrial outer membrane protein porin of 36 kDa-like
blastp_uniprot_sprot sp|P42056|VDAC2_SOLTU 4 241 + 238 Gaps:45 98.19 276 44.28 3e-66 Mitochondrial outer membrane protein porin of 36 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|Q9SRH5|VDAC1_ARATH 4 241 + 238 Gaps:45 98.19 276 42.80 8e-63 Mitochondrial outer membrane protein porin 1 OS Arabidopsis thaliana GN VDAC1 PE 1 SV 3
blastp_uniprot_sprot sp|P42055|VDAC1_SOLTU 4 241 + 238 Gaps:47 98.19 276 41.33 7e-59 Mitochondrial outer membrane protein porin of 34 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|Q6K548|VDAC1_ORYSJ 1 241 + 241 Gaps:46 99.64 274 38.46 2e-54 Mitochondrial outer membrane protein porin 1 OS Oryza sativa subsp. japonica GN VDAC1 PE 1 SV 3
blastp_uniprot_sprot sp|P42054|VDAC_PEA 4 241 + 238 Gaps:45 98.19 276 38.01 2e-53 Outer plastidial membrane protein porin OS Pisum sativum GN POR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SMX3|VDAC3_ARATH 4 241 + 238 Gaps:47 98.18 274 38.66 2e-52 Mitochondrial outer membrane protein porin 3 OS Arabidopsis thaliana GN VDAC3 PE 1 SV 3
blastp_uniprot_sprot sp|Q7F4F8|VDAC3_ORYSJ 4 241 + 238 Gaps:46 98.91 275 38.97 2e-52 Mitochondrial outer membrane protein porin 3 OS Oryza sativa subsp. japonica GN VDAC3 PE 2 SV 1
blastp_uniprot_sprot sp|P46274|VDAC1_WHEAT 4 241 + 238 Gaps:47 98.55 275 38.38 7e-51 Mitochondrial outer membrane porin OS Triticum aestivum GN VDAC1 PE 2 SV 1
blastp_uniprot_sprot sp|P42057|VDAC_MAIZE 5 241 + 237 Gaps:46 97.83 277 36.16 5e-47 Outer plastidial membrane protein porin OS Zea mays GN POR1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JJV1|VDAC4_ORYSJ 6 241 + 236 Gaps:46 85.17 317 38.15 2e-45 Mitochondrial outer membrane protein porin 4 OS Oryza sativa subsp. japonica GN VDAC4 PE 3 SV 3
rpsblast_cdd gnl|CDD|201807 4 235 + 232 Gaps:55 99.63 272 28.78 5e-36 pfam01459 Porin_3 Eukaryotic porin.
rpsblast_cdd gnl|CDD|132767 4 241 + 238 Gaps:56 100.00 276 25.72 2e-34 cd07306 Porin3_VDAC Voltage-dependent anion channel of the outer mitochondrial membrane. The voltage-dependent anion channel (VDAC) regulates the flux of mostly anionic metabolites through the outer mitochondrial membrane which is highly permeable to small molecules. VDAC is the most abundant protein in the outer membrane and membrane potentials can toggle VDAC between open or high-conducting and closed or low-conducting forms. VDAC binds to and is regulated in part by hexokinase an interaction that renders mitochondria less susceptible to pro-apoptotic signals most likely by intefering with VDAC's capability to respond to Bcl-2 family proteins. While VDAC appears to play a key role in mitochondrially induced cell death a proposed involvement in forming the mitochondrial permeability transition pore which is characteristic for damaged mitochondria and apoptosis has been challenged by more recent studies.
rpsblast_kog gnl|CDD|38336 4 240 + 237 Gaps:57 98.22 281 25.36 2e-32 KOG3126 KOG3126 KOG3126 Porin/voltage-dependent anion-selective channel protein [Inorganic ion transport and metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 45 242 198 PTHR11743:SF23 none none none
PANTHER 45 242 198 PTHR11743 none none none
Pfam 34 227 194 PF01459 none Eukaryotic porin IPR027246
Gene3D 37 240 204 G3DSA:2.40.160.10 none none IPR023614
Gene3D 1 24 24 G3DSA:2.40.160.10 none none IPR023614

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting