Protein : Qrob_P0098140.2 Q. robur
Protein Identifier  ? Qrob_P0098140.2 Organism . Name  Quercus robur
Score  91.2 Score Type  egn
Protein Description  (M=1) K02552 - menaquinone-specific isochorismate synthase [EC:5.4.4.2] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 591  
Kegg Orthology  K02552
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0008909 isochorismate synthase activity Catalysis of the reaction: chorismate = isochorismate.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1513750 1 566 + 566 Gaps:45 98.02 556 75.96 0.0 isochorismate synthase putative (EC:5.4.4.2)
blastp_kegg lcl|cit:102630235 4 575 + 572 Gaps:54 97.57 576 73.49 0.0 isochorismate synthase chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10024236mg 4 575 + 572 Gaps:52 97.55 572 73.12 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_013842 1 575 + 575 Gaps:47 99.47 561 72.76 0.0 Isochorismate synthase 2 isoform 1
blastp_kegg lcl|pper:PRUPE_ppa003652mg 11 575 + 565 Gaps:51 97.32 559 74.82 0.0 hypothetical protein
blastp_kegg lcl|pmum:103338412 11 575 + 565 Gaps:51 97.32 559 74.82 0.0 isochorismate synthase 2 chloroplastic-like
blastp_kegg lcl|pxb:103958749 14 575 + 562 Gaps:53 96.61 560 75.42 0.0 isochorismate synthase 2 chloroplastic-like
blastp_kegg lcl|mdm:103437799 14 575 + 562 Gaps:53 96.61 560 75.05 0.0 isochorismate synthase 2 chloroplastic
blastp_kegg lcl|pop:POPTR_0012s07180g 1 574 + 574 Gaps:52 97.55 572 71.86 0.0 POPTRDRAFT_569985 hypothetical protein
blastp_kegg lcl|vvi:100243400 12 566 + 555 Gaps:49 96.79 560 73.25 0.0 isochorismate synthase 2 chloroplastic-like
blastp_pdb 3gse_A 278 565 + 288 Gaps:22 62.45 458 34.27 5e-34 mol:protein length:458 Menaquinone-specific isochorismate synthase
blastp_pdb 3bzn_A 311 574 + 264 Gaps:15 62.41 431 33.46 6e-29 mol:protein length:431 Menaquinone-specific isochorismate synthase
blastp_pdb 3bzm_A 311 574 + 264 Gaps:15 62.41 431 33.46 6e-29 mol:protein length:431 Menaquinone-specific isochorismate synthase
blastp_pdb 2eua_B 311 574 + 264 Gaps:15 62.41 431 33.46 6e-29 mol:protein length:431 Menaquinone-specific isochorismate synthase
blastp_pdb 2eua_A 311 574 + 264 Gaps:15 62.41 431 33.46 6e-29 mol:protein length:431 Menaquinone-specific isochorismate synthase
blastp_pdb 3os6_D 302 563 + 262 Gaps:20 69.17 399 31.52 2e-26 mol:protein length:399 Isochorismate synthase DhbC
blastp_pdb 3os6_C 302 563 + 262 Gaps:20 69.17 399 31.52 2e-26 mol:protein length:399 Isochorismate synthase DhbC
blastp_pdb 3os6_B 302 563 + 262 Gaps:20 69.17 399 31.52 2e-26 mol:protein length:399 Isochorismate synthase DhbC
blastp_pdb 3os6_A 302 563 + 262 Gaps:20 69.17 399 31.52 2e-26 mol:protein length:399 Isochorismate synthase DhbC
blastp_pdb 3hwo_B 308 574 + 267 Gaps:14 69.80 394 30.18 6e-25 mol:protein length:394 Isochorismate synthase entC
blastp_uniprot_sprot sp|Q9M9V6|ICS2_ARATH 1 566 + 566 Gaps:47 97.33 562 61.43 0.0 Isochorismate synthase 2 chloroplastic OS Arabidopsis thaliana GN ICS2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZPC0|ICS_CATRO 4 574 + 571 Gaps:59 98.97 580 59.06 0.0 Isochorismate synthase chloroplastic OS Catharanthus roseus PE 1 SV 1
blastp_uniprot_sprot sp|Q9S7H8|ICS1_ARATH 38 566 + 529 Gaps:47 91.04 569 61.58 0.0 Isochorismate synthase 1 chloroplastic OS Arabidopsis thaliana GN ICS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9CPI5|MENF_PASMU 320 563 + 244 Gaps:14 58.93 431 35.83 6e-33 Menaquinone-specific isochorismate synthase OS Pasteurella multocida (strain Pm70) GN menF PE 3 SV 1
blastp_uniprot_sprot sp|P23973|MENF_BACSU 197 563 + 367 Gaps:57 72.19 471 33.53 2e-32 Menaquinone-specific isochorismate synthase OS Bacillus subtilis (strain 168) GN menF PE 3 SV 2
blastp_uniprot_sprot sp|P44613|MENF_HAEIN 303 565 + 263 Gaps:14 62.56 430 32.71 6e-32 Menaquinone-specific isochorismate synthase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN menF PE 3 SV 1
blastp_uniprot_sprot sp|Q51508|PCHA_PSEAE 195 565 + 371 Gaps:49 72.69 476 32.37 6e-29 Salicylate biosynthesis isochorismate synthase OS Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN pchA PE 1 SV 1
blastp_uniprot_sprot sp|P38051|MENF_ECOLI 311 574 + 264 Gaps:15 62.41 431 33.46 2e-28 Menaquinone-specific isochorismate synthase OS Escherichia coli (strain K12) GN menF PE 1 SV 4
blastp_uniprot_sprot sp|P23300|AMOA_AERHY 308 553 + 246 Gaps:15 64.39 396 31.37 1e-25 Putative isochorismate synthase OS Aeromonas hydrophila GN amoA PE 3 SV 1
blastp_uniprot_sprot sp|P0AEJ2|ENTC_ECOLI 308 574 + 267 Gaps:14 70.33 391 30.18 2e-24 Isochorismate synthase EntC OS Escherichia coli (strain K12) GN entC PE 1 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 286 590 305 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 263 263 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 151 253 103 SSF56322 none none IPR005801
SUPERFAMILY 299 567 269 SSF56322 none none IPR005801
Pfam 318 563 246 PF00425 none chorismate binding enzyme IPR015890
Gene3D 285 572 288 G3DSA:3.60.120.10 none none IPR005801
Gene3D 176 247 72 G3DSA:3.60.120.10 none none IPR005801
PANTHER 112 572 461 PTHR11236:SF3 "KEGG:00130+5.4.4.2","MetaCyc:PWY-5791","MetaCyc:PWY-5837","MetaCyc:PWY-5901","MetaCyc:PWY-6406";signature_desc=ISOCHORISMATE SYNTHASE none IPR004561
PANTHER 112 572 461 PTHR11236 none none none
TIGRFAM 292 567 276 TIGR00543 "KEGG:00130+5.4.4.2","MetaCyc:PWY-5791","MetaCyc:PWY-5837","MetaCyc:PWY-5901","MetaCyc:PWY-6406" isochor_syn: isochorismate synthase IPR004561
Phobius 264 285 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting