Protein : Qrob_P0097610.2 Q. robur
Protein Identifier  ? Qrob_P0097610.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 6.3.4.11 - Biotin--[methylcrotonoyl-CoA-carboxylase] ligase. Code Enzyme  EC:6.3.4.15, EC:6.3.4.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 253  
Kegg Orthology  K01942
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006464 cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity Catalysis of the reaction: ATP + biotin + apo-(acetyl-CoA:carbon-dioxide ligase (ADP forming)) = AMP + diphosphate + (acetyl-CoA:carbon-dioxide ligase (ADP forming)).

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103332920 1 248 + 248 Gaps:4 69.04 365 76.59 5e-141 biotin--protein ligase 2
blastp_kegg lcl|pper:PRUPE_ppa007504mg 1 248 + 248 Gaps:4 69.04 365 76.19 6e-140 hypothetical protein
blastp_kegg lcl|cam:101507301 8 248 + 241 Gaps:4 70.61 347 78.78 2e-138 biotin--protein ligase-like
blastp_kegg lcl|mtr:MTR_3g073010 7 248 + 242 Gaps:5 68.42 361 76.52 6e-138 Holocarboxylase synthetase hcs2
blastp_kegg lcl|cit:102613353 1 248 + 248 Gaps:1 68.03 366 76.31 6e-138 biotin--protein ligase-like
blastp_kegg lcl|pxb:103956969 1 248 + 248 Gaps:4 68.48 368 74.60 7e-138 biotin--protein ligase 2-like
blastp_kegg lcl|fve:101294231 1 248 + 248 Gaps:5 76.90 329 76.68 5e-137 biotin--protein ligase-like
blastp_kegg lcl|mdm:103421290 1 248 + 248 Gaps:4 68.48 368 74.21 3e-136 biotin--protein ligase 2-like
blastp_kegg lcl|cic:CICLE_v10001583mg 1 248 + 248 Gaps:1 68.03 366 75.50 2e-135 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s08830g 1 248 + 248 Gaps:9 65.90 390 77.04 2e-135 POPTRDRAFT_798717 hypothetical protein
blastp_pdb 2ewn_B 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BirA bifunctional protein
blastp_pdb 2ewn_A 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BirA bifunctional protein
blastp_pdb 1hxd_B 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BIRA BIFUNCTIONAL PROTEIN
blastp_pdb 1hxd_A 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BIRA BIFUNCTIONAL PROTEIN
blastp_pdb 1bib_A 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BIR A
blastp_pdb 1bia_A 74 252 + 179 Gaps:36 60.75 321 32.31 2e-16 mol:protein length:321 BirA BIFUNCTIONAL PROTEIN
blastp_pdb 2fyk_B 58 209 + 152 Gaps:14 59.57 235 36.43 3e-16 mol:protein length:235 biotin--protein ligase
blastp_pdb 2fyk_A 58 209 + 152 Gaps:14 59.57 235 36.43 3e-16 mol:protein length:235 biotin--protein ligase
blastp_pdb 2dto_B 58 209 + 152 Gaps:14 59.57 235 36.43 3e-16 mol:protein length:235 235aa long hypothetical biotin--[acetyl-CoA-c
blastp_pdb 2dto_A 58 209 + 152 Gaps:14 59.57 235 36.43 3e-16 mol:protein length:235 235aa long hypothetical biotin--[acetyl-CoA-c
blastp_uniprot_sprot sp|P50747|BPL1_HUMAN 52 216 + 165 Gaps:10 23.28 726 33.73 3e-27 Biotin--protein ligase OS Homo sapiens GN HLCS PE 1 SV 1
blastp_uniprot_sprot sp|Q920N2|BPL1_MOUSE 52 248 + 197 Gaps:14 28.39 722 31.22 5e-27 Biotin--protein ligase OS Mus musculus GN Hlcs PE 2 SV 1
blastp_uniprot_sprot sp|O14353|BPL1_SCHPO 51 252 + 202 Gaps:26 35.50 631 29.91 3e-24 Biotin--protein ligase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN bpl1 PE 3 SV 1
blastp_uniprot_sprot sp|P46363|BIRA_HAEIN 60 207 + 148 Gaps:14 45.70 302 35.51 6e-17 Bifunctional ligase/repressor BirA OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN birA PE 3 SV 1
blastp_uniprot_sprot sp|P06709|BIRA_ECOLI 74 252 + 179 Gaps:36 60.75 321 32.31 8e-16 Bifunctional ligase/repressor BirA OS Escherichia coli (strain K12) GN birA PE 1 SV 1
blastp_uniprot_sprot sp|P37416|BIRA_SALTY 74 250 + 177 Gaps:8 54.69 320 32.57 7e-14 Bifunctional ligase/repressor BirA OS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN birA PE 3 SV 2
blastp_uniprot_sprot sp|P0CI75|BIRA_BACSU 22 226 + 205 Gaps:32 56.31 325 37.16 3e-13 Bifunctional ligase/repressor BirA OS Bacillus subtilis (strain 168) GN birA PE 1 SV 1
blastp_uniprot_sprot sp|E0U174|BIRA_BACPZ 22 229 + 208 Gaps:29 58.15 325 34.39 9e-13 Bifunctional ligase/repressor BirA OS Bacillus subtilis subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 / W23) GN birA PE 3 SV 1
blastp_uniprot_sprot sp|Q5F5C8|BICOA_NEIG1 94 252 + 159 Gaps:43 29.05 592 33.72 1e-12 Bifunctional enzyme BirA/CoaX OS Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN birA/coaX PE 3 SV 1
blastp_uniprot_sprot sp|Q9JXF1|BICOA_NEIMB 94 200 + 107 Gaps:17 17.23 592 42.16 1e-11 Bifunctional enzyme BirA/CoaX OS Neisseria meningitidis serogroup B (strain MC58) GN birA/coaX PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 55 245 191 PS51733 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. IPR004143
PANTHER 48 248 201 PTHR12835 none none IPR004408
Pfam 85 200 116 PF03099 "KEGG:00785+2.3.1.181","MetaCyc:PWY-6987","MetaCyc:PWY-7381" Biotin/lipoate A/B protein ligase family IPR004143
TIGRFAM 73 244 172 TIGR00121 none birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase IPR004408
Gene3D 58 249 192 G3DSA:3.30.930.10 none none none
SUPERFAMILY 56 250 195 SSF55681 none none none
PANTHER 48 248 201 PTHR12835:SF5 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting