Protein : Qrob_P0095860.2 Q. robur
Protein Identifier  ? Qrob_P0095860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K03070 - preprotein translocase subunit SecA Gene Prediction Quality  validated
Protein length 

Sequence

Length: 294  
Kegg Orthology  K03070
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0006605 protein targeting The process of targeting specific proteins to particular membrane-bounded subcellular organelles. Usually requires an organelle specific protein sequence motif.
GO:0017038 protein import The targeting and directed movement of proteins into a cell or organelle. Not all import involves an initial targeting event.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101203540 1 158 + 158 none 15.41 1025 90.51 6e-90 protein translocase subunit SECA1 chloroplastic-like
blastp_kegg lcl|vvi:100250268 1 158 + 158 none 15.80 1000 89.87 2e-88 protein translocase subunit SecA chloroplastic-like
blastp_kegg lcl|cmo:103488832 1 158 + 158 none 15.41 1025 89.87 3e-88 protein translocase subunit SecA chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa000841mg 1 158 + 158 none 16.06 984 89.24 5e-88 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1343310 1 157 + 157 none 16.02 980 89.81 2e-87 hypothetical protein
blastp_kegg lcl|cam:101515753 1 158 + 158 none 15.67 1008 86.71 2e-87 protein translocase subunit SecA chloroplastic-like
blastp_kegg lcl|mdm:103405971 1 158 + 158 none 15.57 1015 89.24 3e-87 protein translocase subunit SecA chloroplastic
blastp_kegg lcl|pxb:103933556 1 158 + 158 none 15.58 1014 89.24 3e-87 protein translocase subunit SecA chloroplastic
blastp_kegg lcl|mtr:MTR_1g086050 1 158 + 158 none 15.63 1011 88.61 4e-87 Protein translocase subunit secA
blastp_kegg lcl|pmum:103327255 1 158 + 158 none 15.40 1026 88.61 5e-87 protein translocase subunit SecA chloroplastic
blastp_pdb 3bxz_B 19 158 + 140 none 29.72 471 63.57 2e-49 mol:protein length:471 Preprotein translocase subunit secA
blastp_pdb 3bxz_A 19 158 + 140 none 29.72 471 63.57 2e-49 mol:protein length:471 Preprotein translocase subunit secA
blastp_pdb 2fsi_B 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsi_A 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsh_B 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsh_A 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsg_B 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsg_A 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsf_B 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_pdb 2fsf_A 18 156 + 139 none 16.30 853 64.03 4e-48 mol:protein length:853 Preprotein translocase secA subunit
blastp_uniprot_sprot sp|Q41062|SECA_PEA 1 158 + 158 none 15.63 1011 86.08 5e-86 Protein translocase subunit SecA chloroplastic OS Pisum sativum GN secA PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYI0|SECA1_ARATH 2 158 + 157 none 15.36 1022 86.62 5e-85 Protein translocase subunit SECA1 chloroplastic OS Arabidopsis thaliana GN SECA1 PE 2 SV 2
blastp_uniprot_sprot sp|Q36795|SECA_SPIOL 13 158 + 146 none 14.09 1036 81.51 1e-72 Protein translocase subunit SecA chloroplastic OS Spinacia oleracea GN secA PE 2 SV 1
blastp_uniprot_sprot sp|A4RW83|SECA_OSTLU 16 156 + 141 none 15.13 932 69.50 3e-59 Protein translocase subunit SecA chloroplastic OS Ostreococcus lucimarinus (strain CCE9901) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|Q0AH18|SECA_NITEC 4 158 + 155 Gaps:2 16.83 909 68.63 3e-58 Protein translocase subunit SecA OS Nitrosomonas eutropha (strain C91) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|Q8DHU4|SECA_THEEB 7 156 + 150 Gaps:2 15.93 929 68.92 3e-57 Protein translocase subunit SecA OS Thermosynechococcus elongatus (strain BP-1) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|Q2JW99|SECA_SYNJA 16 156 + 141 none 14.78 954 70.21 6e-57 Protein translocase subunit SecA OS Synechococcus sp. (strain JA-3-3Ab) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|B0C1V9|SECA_ACAM1 16 158 + 143 none 15.39 929 69.23 1e-56 Protein translocase subunit SecA OS Acaryochloris marina (strain MBIC 11017) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|Q2RLX5|SECA_MOOTA 23 158 + 136 none 15.18 896 69.85 2e-56 Protein translocase subunit SecA OS Moorella thermoacetica (strain ATCC 39073) GN secA PE 3 SV 1
blastp_uniprot_sprot sp|Q82W86|SECA_NITEU 4 156 + 153 Gaps:2 16.61 909 68.21 3e-56 Protein translocase subunit SecA OS Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) GN secA PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 16 158 143 G3DSA:3.40.50.300 none none IPR027417
Phobius 290 293 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 268 289 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 2 157 156 PTHR30612:SF1 none none none
Phobius 1 267 267 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 67 91 25 PR00906 none SecA protein signature IPR000185
PRINTS 105 119 15 PR00906 none SecA protein signature IPR000185
PRINTS 121 131 11 PR00906 none SecA protein signature IPR000185
ProSiteProfiles 7 293 287 PS51196 none SecA family profile. IPR014018
SUPERFAMILY 21 158 138 SSF52540 none none IPR027417
PANTHER 2 157 156 PTHR30612 none none none
Pfam 19 159 141 PF07517 none SecA DEAD-like domain IPR011115
SMART 11 279 269 SM00957 none SecA DEAD-like domain IPR011115

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting