Protein : Qrob_P0095560.2 Q. robur
Protein Identifier  ? Qrob_P0095560.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=102) PF03140 - Plant protein of unknown function Gene Prediction Quality  validated
Protein length 

Sequence

Length: 347  
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0 Synonyms

0 GO Terms

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0017s05350g 52 346 + 295 Gaps:58 75.99 454 38.55 9e-61 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0924580 45 344 + 300 Gaps:66 83.14 433 37.78 1e-59 hypothetical protein
blastp_kegg lcl|tcc:TCM_005662 25 344 + 320 Gaps:73 88.39 422 37.00 6e-59 hypothetical protein
blastp_kegg lcl|tcc:TCM_005664 23 345 + 323 Gaps:70 89.28 429 36.55 2e-58 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1609080 34 322 + 289 Gaps:80 94.41 376 38.87 7e-57 hypothetical protein
blastp_kegg lcl|pop:POPTR_0048s00270g 48 346 + 299 Gaps:73 81.00 442 36.59 1e-56 hypothetical protein
blastp_kegg lcl|pop:POPTR_0017s05400g 52 346 + 295 Gaps:100 86.99 438 35.70 2e-56 hypothetical protein
blastp_kegg lcl|tcc:TCM_005673 27 344 + 318 Gaps:82 88.48 434 35.42 4e-56 Uncharacterized protein isoform 1
blastp_kegg lcl|pxb:103937096 54 344 + 291 Gaps:70 82.26 434 34.73 1e-55 UPF0481 protein At3g47200-like
blastp_kegg lcl|pper:PRUPE_ppa023674mg 46 332 + 287 Gaps:26 81.97 355 41.24 5e-55 hypothetical protein
blastp_uniprot_sprot sp|Q9SD53|Y3720_ARATH 43 210 + 168 Gaps:23 36.34 476 34.68 4e-18 UPF0481 protein At3g47200 OS Arabidopsis thaliana GN At3g47200 PE 1 SV 1
blastp_uniprot_sprot sp|P0C897|Y3264_ARATH 53 208 + 156 Gaps:25 29.30 529 29.68 9e-11 Putative UPF0481 protein At3g02645 OS Arabidopsis thaliana GN At3g02645 PE 3 SV 1
rpsblast_cdd gnl|CDD|190538 55 344 + 290 Gaps:81 93.80 387 31.40 5e-65 pfam03140 DUF247 Plant protein of unknown function. The function of the plant proteins constituting this family is unknown.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 22 346 325 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 344 344 PTHR31170 none none none
Phobius 18 21 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 55 238 184 PF03140 none Plant protein of unknown function IPR004158
Pfam 238 344 107 PF03140 none Plant protein of unknown function IPR004158
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 2 0.940 0.009 NON-PLANT 21