Protein : Qrob_P0095530.2 Q. robur
Protein Identifier  ? Qrob_P0095530.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) KOG1823 - DRIM (Down-regulated in metastasis)-like proteins [Defense mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 336  
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0 Synonyms

0 GO Terms

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0001s32620g 1 335 + 335 Gaps:48 14.21 2597 57.18 1e-117 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa000015mg 1 335 + 335 Gaps:46 13.11 2663 57.31 1e-110 hypothetical protein
blastp_kegg lcl|pmum:103327984 1 335 + 335 Gaps:45 12.85 2723 56.29 1e-110 small subunit processome component 20 homolog
blastp_kegg lcl|pmum:103328019 1 335 + 335 Gaps:46 12.81 2725 57.02 1e-109 small subunit processome component 20 homolog
blastp_kegg lcl|pper:PRUPE_ppa015122mg 1 335 + 335 Gaps:45 13.25 2641 56.29 2e-109 hypothetical protein
blastp_kegg lcl|mdm:103440681 1 311 + 311 Gaps:38 12.22 2724 56.76 2e-107 small subunit processome component 20 homolog
blastp_kegg lcl|pxb:103948796 1 311 + 311 Gaps:38 13.92 2392 57.06 6e-107 small subunit processome component 20 homolog
blastp_kegg lcl|pxb:103948763 1 311 + 311 Gaps:38 12.23 2723 57.06 6e-107 U3 small nucleolar RNA-associated protein 20-like
blastp_kegg lcl|cam:101506931 1 317 + 317 Gaps:32 12.78 2700 53.33 1e-105 UTP20 UTP20 small subunit (SSU) processome component homolog (yeast)
blastp_kegg lcl|gmx:100811612 1 317 + 317 Gaps:44 12.35 2696 54.05 3e-103 small subunit processome component 20 homolog
blastp_uniprot_sprot sp|O60055|UTP20_SCHPO 67 285 + 219 Gaps:4 8.78 2493 31.05 1e-23 U3 small nucleolar RNA-associated protein 20 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN utp20 PE 3 SV 1
blastp_uniprot_sprot sp|O75691|UTP20_HUMAN 104 311 + 208 Gaps:10 7.11 2785 32.83 1e-21 Small subunit processome component 20 homolog OS Homo sapiens GN UTP20 PE 1 SV 3
blastp_uniprot_sprot sp|Q5XG71|UTP20_MOUSE 104 311 + 208 Gaps:10 7.10 2788 31.31 3e-20 Small subunit processome component 20 homolog OS Mus musculus GN Utp20 PE 2 SV 2
blastp_uniprot_sprot sp|P35194|UTP20_YEAST 91 280 + 190 Gaps:3 7.66 2493 30.37 3e-14 U3 small nucleolar RNA-associated protein 20 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UTP20 PE 1 SV 3
rpsblast_kog gnl|CDD|37034 3 292 + 290 Gaps:11 33.94 1364 16.63 1e-20 KOG1823 KOG1823 KOG1823 DRIM (Down-regulated in metastasis)-like proteins [Defense mechanisms].

2 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 104 279 176 PTHR17695:SF11 none none none
PANTHER 104 279 176 PTHR17695 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting