Protein : Qrob_P0095520.2 Q. robur
Protein Identifier  ? Qrob_P0095520.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=4) KOG1823 - DRIM (Down-regulated in metastasis)-like proteins [Defense mechanisms]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 525  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328019 1 524 + 524 Gaps:34 20.40 2725 62.95 0.0 small subunit processome component 20 homolog
blastp_kegg lcl|pper:PRUPE_ppa000015mg 1 524 + 524 Gaps:34 20.88 2663 62.95 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa015122mg 1 524 + 524 Gaps:34 21.05 2641 62.77 0.0 hypothetical protein
blastp_kegg lcl|pmum:103327984 1 524 + 524 Gaps:34 20.42 2723 62.41 0.0 small subunit processome component 20 homolog
blastp_kegg lcl|mdm:103440681 1 524 + 524 Gaps:37 20.45 2724 60.50 0.0 small subunit processome component 20 homolog
blastp_kegg lcl|tcc:TCM_020246 1 524 + 524 Gaps:30 20.33 2725 59.03 0.0 ARM repeat superfamily protein putative
blastp_kegg lcl|pxb:103948796 1 524 + 524 Gaps:37 23.29 2392 60.50 0.0 small subunit processome component 20 homolog
blastp_kegg lcl|pxb:103948763 1 524 + 524 Gaps:37 20.46 2723 60.50 0.0 U3 small nucleolar RNA-associated protein 20-like
blastp_kegg lcl|cic:CICLE_v10004117mg 1 524 + 524 Gaps:39 20.63 2651 60.51 0.0 hypothetical protein
blastp_kegg lcl|cit:102625218 1 524 + 524 Gaps:41 20.16 2703 60.73 0.0 small subunit processome component 20 homolog
blastp_uniprot_sprot sp|O75691|UTP20_HUMAN 56 520 + 465 Gaps:88 18.13 2785 21.39 1e-15 Small subunit processome component 20 homolog OS Homo sapiens GN UTP20 PE 1 SV 3
blastp_uniprot_sprot sp|O60055|UTP20_SCHPO 254 523 + 270 Gaps:26 10.03 2493 27.60 2e-13 U3 small nucleolar RNA-associated protein 20 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN utp20 PE 3 SV 1
blastp_uniprot_sprot sp|P35194|UTP20_YEAST 255 523 + 269 Gaps:25 10.03 2493 24.80 1e-12 U3 small nucleolar RNA-associated protein 20 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN UTP20 PE 1 SV 3
blastp_uniprot_sprot sp|Q5XG71|UTP20_MOUSE 56 520 + 465 Gaps:114 18.04 2788 21.87 6e-10 Small subunit processome component 20 homolog OS Mus musculus GN Utp20 PE 2 SV 2
rpsblast_kog gnl|CDD|37034 92 524 + 433 Gaps:61 32.70 1364 23.54 6e-11 KOG1823 KOG1823 KOG1823 DRIM (Down-regulated in metastasis)-like proteins [Defense mechanisms].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 80 355 276 PTHR17695:SF11 none none none
PANTHER 371 524 154 PTHR17695:SF11 none none none
SUPERFAMILY 202 276 75 SSF48371 none none IPR016024
SUPERFAMILY 315 513 199 SSF48371 none none IPR016024
Gene3D 476 512 37 G3DSA:1.25.10.10 none none IPR011989
Gene3D 192 275 84 G3DSA:1.25.10.10 none none IPR011989
PANTHER 80 355 276 PTHR17695 none none none
PANTHER 371 524 154 PTHR17695 none none none

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting