Protein : Qrob_P0094410.2 Q. robur
Protein Identifier  ? Qrob_P0094410.2 Organism . Name  Quercus robur
Protein Description  (M=127) PF13947 - Wall-associated receptor kinase galacturonan-binding Alias (in v1)  Qrob_P0457440.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 172  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103417249 21 170 + 150 Gaps:41 55.96 327 38.80 4e-30 wall-associated receptor kinase-like 8
blastp_kegg lcl|pper:PRUPE_ppa018374mg 1 170 + 170 Gaps:68 33.09 689 35.53 4e-30 hypothetical protein
blastp_kegg lcl|mdm:103405282 21 170 + 150 Gaps:41 25.10 729 38.80 1e-29 wall-associated receptor kinase-like 22
blastp_kegg lcl|pmum:103328958 1 170 + 170 Gaps:68 31.15 732 35.09 7e-29 wall-associated receptor kinase-like 22
blastp_kegg lcl|pop:POPTR_0005s22500g 21 170 + 150 Gaps:43 27.69 661 38.80 9e-25 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000464mg 21 170 + 150 Gaps:51 26.83 697 35.83 5e-24 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10003390mg 21 170 + 150 Gaps:51 27.74 674 34.76 2e-23 hypothetical protein
blastp_kegg lcl|vvi:100257661 22 170 + 149 Gaps:41 22.63 822 33.87 2e-23 wall-associated receptor kinase-like 1-like
blastp_kegg lcl|vvi:100257634 21 170 + 150 Gaps:43 25.95 713 35.68 6e-23 wall-associated receptor kinase-like 2-like
blastp_kegg lcl|cit:102608101 21 170 + 150 Gaps:48 26.51 694 35.33 6e-23 wall-associated receptor kinase-like 1-like
blastp_uniprot_sprot sp|Q9LMT9|WAKLL_ARATH 25 123 + 99 Gaps:16 14.53 764 34.23 5e-11 Putative wall-associated receptor kinase-like 13 OS Arabidopsis thaliana GN WAKL13 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LN59|WAKLK_ARATH 21 130 + 110 Gaps:22 14.97 788 36.44 6e-10 Putative wall-associated receptor kinase-like 11 OS Arabidopsis thaliana GN WAKL11 PE 3 SV 2
blastp_uniprot_sprot sp|Q9C9L5|WAKLH_ARATH 21 122 + 102 Gaps:16 14.14 792 33.04 3e-08 Wall-associated receptor kinase-like 9 OS Arabidopsis thaliana GN WAKL9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S9M3|WAKLC_ARATH 22 170 + 149 Gaps:53 27.40 730 24.00 4e-08 Wall-associated receptor kinase-like 3 OS Arabidopsis thaliana GN WAKL3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9S9M5|WAKLA_ARATH 22 170 + 149 Gaps:51 27.12 730 25.25 2e-07 Wall-associated receptor kinase-like 1 OS Arabidopsis thaliana GN WAKL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7X8C5|WAKLB_ARATH 22 170 + 149 Gaps:59 25.40 748 27.37 1e-06 Wall-associated receptor kinase-like 2 OS Arabidopsis thaliana GN WAKL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M092|WAKLM_ARATH 21 128 + 108 Gaps:11 13.87 786 37.61 1e-06 Wall-associated receptor kinase-like 17 OS Arabidopsis thaliana GN WAKL17 PE 3 SV 2
rpsblast_cdd gnl|CDD|206118 21 110 + 90 Gaps:5 83.96 106 41.57 2e-18 pfam13947 GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding. This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins.

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 16 21 6 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 22 171 150 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 21 109 89 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287

2 Localization

Analysis Start End Length
SignalP_EUK 1 21 20
SignalP_GRAM_POSITIVE 1 24 23

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.941 0.023 NON-PLANT 21