Protein : Qrob_P0089870.2 Q. robur
Protein Identifier  ? Qrob_P0089870.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 5.4.99.5 - Chorismate mutase. Code Enzyme  EC:5.4.99.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 254  
Kegg Orthology  K01850
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0009073 aromatic amino acid family biosynthetic process The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).
GO:0046417 chorismate metabolic process The chemical reactions and pathways involving chorismate, the anion of (3R-trans)-3-((1-carboxyethenyl)oxy)-4-hydroxy-1,5-cyclohexadiene-1-carboxylic acid.
GO:0004106 chorismate mutase activity Catalysis of the reaction: chorismate = prephenate.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_036909 3 253 + 251 Gaps:1 96.90 258 71.60 4e-128 Chorismate mutase 2
blastp_kegg lcl|pmum:103320737 3 253 + 251 Gaps:6 96.84 253 71.02 4e-121 chorismate mutase 2
blastp_kegg lcl|rcu:RCOM_0920930 5 253 + 249 Gaps:2 97.63 253 68.02 7e-119 chorismate mutase cm2 putative (EC:5.4.99.5)
blastp_kegg lcl|cmo:103493750 2 253 + 252 Gaps:2 90.91 275 67.60 6e-118 chorismate mutase 2
blastp_kegg lcl|cic:CICLE_v10009191mg 3 253 + 251 Gaps:3 92.94 269 68.40 2e-117 hypothetical protein
blastp_kegg lcl|cit:102628351 3 253 + 251 Gaps:3 92.94 269 68.40 2e-117 chorismate mutase 2-like
blastp_kegg lcl|gmx:100791095 2 253 + 252 Gaps:2 91.58 273 68.40 2e-116 chorismate mutase 2-like
blastp_kegg lcl|pop:POPTR_0018s02520g 2 253 + 252 Gaps:2 98.04 255 64.80 1e-114 POPTRDRAFT_779123 hypothetical protein
blastp_kegg lcl|gmx:100791341 2 253 + 252 Gaps:3 96.17 261 66.53 4e-114 chorismate mutase chloroplastic-like
blastp_kegg lcl|mtr:MTR_1g013820 2 253 + 252 Gaps:3 96.17 261 65.74 2e-113 Chorismate mutase
blastp_pdb 4csm_B 6 253 + 248 Gaps:6 96.09 256 39.84 2e-55 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 4csm_A 6 253 + 248 Gaps:6 96.09 256 39.84 2e-55 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 2csm_A 6 253 + 248 Gaps:6 96.09 256 39.84 2e-55 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 1csm_B 6 253 + 248 Gaps:6 96.09 256 39.84 6e-55 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 1csm_A 6 253 + 248 Gaps:6 96.09 256 39.84 6e-55 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 5csm_A 6 253 + 248 Gaps:6 96.09 256 39.43 1e-53 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 3csm_B 6 253 + 248 Gaps:6 96.09 256 39.43 2e-53 mol:protein length:256 CHORISMATE MUTASE
blastp_pdb 3csm_A 6 253 + 248 Gaps:6 96.09 256 39.43 2e-53 mol:protein length:256 CHORISMATE MUTASE
blastp_uniprot_sprot sp|Q9S7H4|CM2_ARATH 2 253 + 252 Gaps:5 95.47 265 66.80 2e-114 Chorismate mutase 2 OS Arabidopsis thaliana GN CM2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C544|CM3_ARATH 6 253 + 248 Gaps:4 78.48 316 56.05 3e-93 Chorismate mutase 3 chloroplastic OS Arabidopsis thaliana GN CM3 PE 1 SV 1
blastp_uniprot_sprot sp|P42738|CM1_ARATH 3 253 + 251 Gaps:11 75.88 340 53.10 4e-90 Chorismate mutase 1 chloroplastic OS Arabidopsis thaliana GN CM1 PE 1 SV 3
blastp_uniprot_sprot sp|P32178|CHMU_YEAST 6 253 + 248 Gaps:6 96.09 256 39.84 9e-55 Chorismate mutase OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN ARO7 PE 1 SV 1
blastp_uniprot_sprot sp|O13739|CHMU_SCHPO 1 252 + 252 Gaps:8 98.80 251 39.52 5e-54 Probable chorismate mutase OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC16E8.04c PE 3 SV 1
rpsblast_cdd gnl|CDD|177978 3 253 + 251 Gaps:4 88.38 284 68.53 1e-123 PLN02344 PLN02344 chorismate mutase.
rpsblast_cdd gnl|CDD|130861 6 253 + 248 Gaps:6 100.00 246 48.37 8e-79 TIGR01802 CM_pl-yst monofunctional chorismate mutase eukaryotic type. This model represents the plant and yeast (plastidic) chorismate mutase. These CM's are distinct from other forms by the presence of an extended regulatory domain.
rpsblast_kog gnl|CDD|36014 3 253 + 251 Gaps:4 95.80 262 57.37 2e-93 KOG0795 KOG0795 KOG0795 Chorismate mutase [Amino acid transport and metabolism].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 1 253 253 PIRSF017318 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120" none IPR008238
TIGRFAM 6 253 248 TIGR01802 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120" CM_pl-yst: chorismate mutase IPR008238
SUPERFAMILY 4 253 250 SSF48600 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120" none IPR020822
PANTHER 4 253 250 PTHR21145:SF1 none none none
Gene3D 3 253 251 G3DSA:1.10.590.10 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120" none IPR008238
PANTHER 4 253 250 PTHR21145 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120";signature_desc=CHORISMATE MUTASE none IPR008238
ProSiteProfiles 1 253 253 PS51169 "KEGG:00400+5.4.99.5","MetaCyc:PWY-3461","MetaCyc:PWY-3462","MetaCyc:PWY-6120","MetaCyc:PWY-6627","MetaCyc:PWY-7626","UniPathway:UPA00120" Chorismate mutase domain profile. IPR008238

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting