Protein : Qrob_P0089690.2 Q. robur
Protein Identifier  ? Qrob_P0089690.2 Organism . Name  Quercus robur
Protein Description  (M=127) PF13947 - Wall-associated receptor kinase galacturonan-binding Alias (in v1)  Qrob_P0184260.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 274  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103417249 42 250 + 209 Gaps:14 65.75 327 46.05 4e-51 wall-associated receptor kinase-like 8
blastp_kegg lcl|mdm:103405282 42 250 + 209 Gaps:14 29.49 729 46.98 8e-50 wall-associated receptor kinase-like 22
blastp_kegg lcl|pper:PRUPE_ppa018374mg 30 251 + 222 Gaps:15 33.53 689 44.16 2e-49 hypothetical protein
blastp_kegg lcl|pmum:103328958 30 251 + 222 Gaps:15 31.56 732 42.86 1e-48 wall-associated receptor kinase-like 22
blastp_kegg lcl|pper:PRUPE_ppa022257mg 41 249 + 209 Gaps:17 32.58 663 42.59 2e-40 hypothetical protein
blastp_kegg lcl|pmum:103322491 41 242 + 202 Gaps:17 28.79 726 43.06 2e-39 wall-associated receptor kinase-like 8
blastp_kegg lcl|pmum:103322492 41 249 + 209 Gaps:16 32.29 672 41.01 2e-38 wall-associated receptor kinase-like 1
blastp_kegg lcl|vvi:100854955 42 242 + 201 Gaps:13 24.22 867 39.05 5e-38 wall-associated receptor kinase-like 10-like
blastp_kegg lcl|pop:POPTR_0005s22500g 28 244 + 217 Gaps:16 33.74 661 39.91 1e-37 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa018696mg 40 242 + 203 Gaps:23 28.97 725 43.81 3e-37 hypothetical protein
blastp_uniprot_sprot sp|Q9SA25|WAKLG_ARATH 28 243 + 216 Gaps:31 32.64 720 33.62 2e-22 Wall-associated receptor kinase-like 8 OS Arabidopsis thaliana GN WAKL8 PE 2 SV 1
blastp_uniprot_sprot sp|Q7X8C5|WAKLB_ARATH 21 241 + 221 Gaps:35 31.28 748 32.05 9e-18 Wall-associated receptor kinase-like 2 OS Arabidopsis thaliana GN WAKL2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY17|WAKLI_ARATH 20 184 + 165 Gaps:21 24.23 751 31.32 1e-15 Wall-associated receptor kinase-like 22 OS Arabidopsis thaliana GN WAKL22 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S9M1|WAKLE_ARATH 49 241 + 193 Gaps:39 29.27 731 30.37 4e-15 Wall-associated receptor kinase-like 5 OS Arabidopsis thaliana GN WAKL5 PE 2 SV 2
blastp_uniprot_sprot sp|Q9S9M3|WAKLC_ARATH 13 245 + 233 Gaps:36 35.21 730 27.63 6e-15 Wall-associated receptor kinase-like 3 OS Arabidopsis thaliana GN WAKL3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8GXQ3|WAKLF_ARATH 49 219 + 171 Gaps:37 30.53 642 30.10 1e-14 Wall-associated receptor kinase-like 6 OS Arabidopsis thaliana GN WAKL6 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VYA3|WAKLJ_ARATH 49 219 + 171 Gaps:55 27.05 769 29.33 2e-14 Wall-associated receptor kinase-like 10 OS Arabidopsis thaliana GN WAKL10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S9M2|WAKLD_ARATH 50 221 + 172 Gaps:34 25.23 761 30.73 2e-14 Wall-associated receptor kinase-like 4 OS Arabidopsis thaliana GN WAKL4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LMP1|WAK2_ARATH 47 245 + 199 Gaps:27 28.42 732 30.29 4e-14 Wall-associated receptor kinase 2 OS Arabidopsis thaliana GN WAK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9S9M5|WAKLA_ARATH 49 241 + 193 Gaps:33 29.32 730 30.37 8e-14 Wall-associated receptor kinase-like 1 OS Arabidopsis thaliana GN WAKL1 PE 1 SV 1
rpsblast_cdd gnl|CDD|206118 47 142 + 96 Gaps:10 100.00 106 43.40 1e-27 pfam13947 GUB_WAK_bind Wall-associated receptor kinase galacturonan-binding. This cysteine-rich GUB_WAK_bind domain is the extracellular part of this serine/threonine kinase that binds to the cell-wall pectins.

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 47 142 96 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting