Protein : Qrob_P0088690.2 Q. robur
Protein Identifier  ? Qrob_P0088690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PF00024 - PAN domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 488  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0048544 recognition of pollen The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011506mg 1 486 + 486 Gaps:18 96.11 514 61.54 0.0 hypothetical protein
blastp_kegg lcl|cit:102610599 1 486 + 486 Gaps:20 96.11 514 61.94 0.0 PAN domain-containing protein At5g03700-like
blastp_kegg lcl|vvi:100258024 7 482 + 476 Gaps:10 98.14 485 60.29 0.0 PAN domain-containing protein At5g03700-like
blastp_kegg lcl|pxb:103944295 1 482 + 482 Gaps:25 92.35 536 61.01 0.0 PAN domain-containing protein At5g03700-like
blastp_kegg lcl|pmum:103339730 27 482 + 456 Gaps:17 92.63 502 61.08 0.0 PAN domain-containing protein At5g03700
blastp_kegg lcl|pper:PRUPE_ppa024396mg 35 482 + 448 Gaps:17 93.84 487 63.02 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0383350 5 482 + 478 Gaps:28 99.39 491 62.30 0.0 ATP binding protein putative
blastp_kegg lcl|tcc:TCM_022450 1 486 + 486 Gaps:27 99.20 503 60.52 0.0 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain putative
blastp_kegg lcl|pxb:103955178 1 482 + 482 Gaps:18 92.68 533 59.11 0.0 PAN domain-containing protein At5g03700-like
blastp_kegg lcl|mdm:103424233 1 482 + 482 Gaps:19 92.52 535 60.20 0.0 PAN domain-containing protein At5g03700-like
blastp_uniprot_sprot sp|Q9LZR8|Y5370_ARATH 35 482 + 448 Gaps:14 91.70 482 53.62 1e-167 PAN domain-containing protein At5g03700 OS Arabidopsis thaliana GN At5g03700 PE 4 SV 1
blastp_uniprot_sprot sp|Q8RWZ5|SD25_ARATH 22 413 + 392 Gaps:47 49.09 821 29.03 4e-24 G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS Arabidopsis thaliana GN SD25 PE 1 SV 1
blastp_uniprot_sprot sp|O65238|Y5537_ARATH 71 443 + 373 Gaps:52 45.07 872 26.97 2e-18 G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS Arabidopsis thaliana GN At5g35370 PE 2 SV 2
blastp_uniprot_sprot sp|O64780|Y1614_ARATH 54 459 + 406 Gaps:56 51.35 814 24.88 7e-17 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61400 OS Arabidopsis thaliana GN At1g61400 PE 3 SV 4
blastp_uniprot_sprot sp|Q9SXB3|Y1112_ARATH 38 459 + 422 Gaps:74 53.41 820 24.89 9e-17 G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS Arabidopsis thaliana GN At1g11280 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FLV4|Y5248_ARATH 59 392 + 334 Gaps:76 43.35 872 26.98 1e-15 G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS Arabidopsis thaliana GN At5g24080 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S972|SD16_ARATH 39 459 + 421 Gaps:70 51.83 847 25.51 3e-13 Receptor-like serine/threonine-protein kinase SD1-6 OS Arabidopsis thaliana GN SD16 PE 1 SV 2
blastp_uniprot_sprot sp|P17801|KPRO_MAIZE 54 394 + 341 Gaps:55 43.57 817 25.28 7e-13 Putative receptor protein kinase ZmPK1 OS Zea mays GN PK1 PE 2 SV 2
blastp_uniprot_sprot sp|O64782|SD129_ARATH 38 460 + 423 Gaps:66 54.78 805 24.94 2e-12 G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS Arabidopsis thaliana GN SD129 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SY95|Y1155_ARATH 12 451 + 440 Gaps:79 55.49 802 26.74 6e-12 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 OS Arabidopsis thaliana GN At1g61550 PE 2 SV 1
rpsblast_cdd gnl|CDD|201803 87 166 + 80 Gaps:7 76.15 109 39.76 3e-11 pfam01453 B_lectin D-mannose binding lectin. These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.
rpsblast_cdd gnl|CDD|28910 46 156 + 111 Gaps:9 98.28 116 33.33 7e-07 cd00028 B_lectin Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes such as cell-cell and host-pathogen interactions serum glycoprotein turnover and innate immune responses..

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 27 27 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 84 205 122 SSF51110 none none IPR001480
Phobius 424 449 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 261 311 51 PF00954 none S-locus glycoprotein family IPR000858
Phobius 1 12 12 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 358 394 37 PF00024 none PAN domain IPR003014
PANTHER 108 477 370 PTHR11795:SF369 none none none
Phobius 450 487 38 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 331 415 85 PS50948 none PAN/Apple domain profile. IPR003609
Phobius 24 27 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SMART 44 156 113 SM00108 none Bulb-type mannose-specific lectin IPR001480
PANTHER 108 477 370 PTHR11795 none none none
Phobius 28 423 396 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 13 23 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 55 161 107 G3DSA:2.90.10.10 none none IPR001480
Pfam 85 169 85 PF01453 none D-mannose binding lectin IPR001480
PIRSF 4 429 426 PIRSF002686 none none none

2 Localization

Analysis Start End Length
SignalP_EUK 1 27 26
TMHMM 424 446 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Secretory pathway 2 0.871 0.086 NON-PLANT 28