Protein : Qrob_P0088050.2 Q. robur
Protein Identifier  ? Qrob_P0088050.2 Organism . Name  Quercus robur
Score  97.1 Score Type  egn
Protein Description  (M=2) K08057 - calreticulin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 331  
Kegg Orthology  K08057
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051082 unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0007s01690g 12 318 + 307 Gaps:11 78.42 380 86.91 0.0 hypothetical protein
blastp_kegg lcl|cmo:103494621 5 318 + 314 Gaps:10 70.53 431 83.55 0.0 calreticulin-3
blastp_kegg lcl|csv:101203114 5 318 + 314 Gaps:10 70.53 431 82.24 0.0 calreticulin-3-like
blastp_kegg lcl|pxb:103933225 24 318 + 295 Gaps:10 66.28 430 87.02 1e-179 calreticulin-3
blastp_kegg lcl|mdm:103432753 24 318 + 295 Gaps:10 66.28 430 87.72 1e-179 calreticulin-3
blastp_kegg lcl|pper:PRUPE_ppa006217mg 25 318 + 294 Gaps:10 67.30 422 87.68 4e-179 hypothetical protein
blastp_kegg lcl|pmum:103322299 25 318 + 294 Gaps:10 67.30 422 87.68 1e-178 calreticulin-3
blastp_kegg lcl|mtr:MTR_4g068080 13 318 + 306 Gaps:12 70.00 420 84.69 2e-177 Calreticulin-3
blastp_kegg lcl|cic:CICLE_v10020358mg 11 318 + 308 Gaps:11 71.57 415 87.54 1e-176 hypothetical protein
blastp_kegg lcl|cit:102608719 11 318 + 308 Gaps:11 71.39 416 87.54 1e-176 calreticulin-3-like
blastp_pdb 3rg0_A 60 306 + 247 Gaps:20 70.18 332 51.07 2e-72 mol:protein length:332 Calreticulin
blastp_pdb 3o0x_B 60 226 + 167 Gaps:3 62.27 273 49.41 1e-52 mol:protein length:273 Calreticulin
blastp_pdb 3o0x_A 60 226 + 167 Gaps:3 62.27 273 49.41 1e-52 mol:protein length:273 Calreticulin
blastp_pdb 3o0w_A 60 226 + 167 Gaps:3 62.27 273 49.41 1e-52 mol:protein length:273 Calreticulin
blastp_pdb 3o0v_A 60 226 + 167 Gaps:3 62.27 273 49.41 1e-52 mol:protein length:273 Calreticulin
blastp_pdb 3pow_A 58 224 + 167 Gaps:3 64.15 265 48.82 6e-52 mol:protein length:265 calreticulin
blastp_pdb 3pos_C 58 224 + 167 Gaps:3 64.15 265 48.82 6e-52 mol:protein length:265 Calreticulin
blastp_pdb 3pos_B 58 224 + 167 Gaps:3 64.15 265 48.82 6e-52 mol:protein length:265 Calreticulin
blastp_pdb 3pos_A 58 224 + 167 Gaps:3 64.15 265 48.82 6e-52 mol:protein length:265 Calreticulin
blastp_pdb 1jhn_A 28 321 + 294 Gaps:75 80.90 424 36.73 4e-50 mol:protein length:424 calnexin
blastp_uniprot_sprot sp|O04153|CALR3_ARATH 12 318 + 307 Gaps:10 70.05 424 81.48 1e-173 Calreticulin-3 OS Arabidopsis thaliana GN CRT3 PE 2 SV 2
blastp_uniprot_sprot sp|P93508|CALR_RICCO 27 318 + 292 Gaps:10 67.95 415 64.54 3e-119 Calreticulin OS Ricinus communis PE 2 SV 1
blastp_uniprot_sprot sp|O81919|CALR_BETVU 27 318 + 292 Gaps:10 67.79 416 64.89 5e-119 Calreticulin OS Beta vulgaris PE 2 SV 1
blastp_uniprot_sprot sp|Q40401|CALR_NICPL 7 318 + 312 Gaps:14 71.63 416 62.75 7e-119 Calreticulin OS Nicotiana plumbaginifolia GN CAL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q38858|CALR2_ARATH 15 318 + 304 Gaps:10 69.34 424 62.59 7e-118 Calreticulin-2 OS Arabidopsis thaliana GN CRT2 PE 1 SV 3
blastp_uniprot_sprot sp|Q9ZPP1|CALR_BERST 20 318 + 299 Gaps:10 69.47 416 64.01 3e-117 Calreticulin OS Berberis stolonifera PE 2 SV 1
blastp_uniprot_sprot sp|O04151|CALR1_ARATH 10 318 + 309 Gaps:15 69.18 425 62.59 5e-117 Calreticulin-1 OS Arabidopsis thaliana GN CRT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XF98|CALR_PRUAR 31 318 + 288 Gaps:10 66.03 421 65.47 2e-116 Calreticulin OS Prunus armeniaca PE 2 SV 1
blastp_uniprot_sprot sp|Q9SLY8|CALR_ORYSJ 30 318 + 289 Gaps:10 65.80 424 62.72 2e-114 Calreticulin OS Oryza sativa subsp. japonica GN Os07g0246200 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SP22|CALR_MAIZE 30 318 + 289 Gaps:10 66.43 420 61.29 2e-109 Calreticulin OS Zea mays GN CRT PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 12 318 307 PTHR11073 none none IPR001580
Pfam 64 318 255 PF00262 none Calreticulin family IPR001580
Phobius 30 330 301 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 24 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 12 318 307 PTHR11073:SF6 none none none
ProSitePatterns 118 133 16 PS00803 none Calreticulin family signature 1. IPR018124
SUPERFAMILY 221 319 99 SSF63887 none none IPR009033
SUPERFAMILY 54 237 184 SSF49899 none none IPR013320
Phobius 25 29 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none
PRINTS 301 320 20 PR00626 none Calreticulin signature IPR001580
PRINTS 120 138 19 PR00626 none Calreticulin signature IPR001580
PRINTS 146 162 17 PR00626 none Calreticulin signature IPR001580
PRINTS 235 248 14 PR00626 none Calreticulin signature IPR001580
PRINTS 263 285 23 PR00626 none Calreticulin signature IPR001580
Phobius 1 11 11 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 25 258 234 G3DSA:2.60.120.200 none none IPR013320

1 Localization

Analysis Start End Length
SignalP_EUK 1 29 28

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 29   Secretory pathway 1 0.980 0.011 NON-PLANT 29