Protein : Qrob_P0087000.2 Q. robur
Protein Identifier  ? Qrob_P0087000.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K18417 - ERI1 exoribonuclease 2 [EC:3.1.-.-] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 406  
Kegg Orthology  K18417
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0004527 exonuclease activity Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' or 5' end.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa006353mg 1 405 + 405 Gaps:3 97.83 415 79.31 0.0 hypothetical protein
blastp_kegg lcl|pmum:103330804 1 405 + 405 Gaps:3 97.83 415 79.06 0.0 uncharacterized LOC103330804
blastp_kegg lcl|vvi:100853630 1 405 + 405 Gaps:1 97.83 415 75.12 0.0 uncharacterized LOC100853630
blastp_kegg lcl|tcc:TCM_044782 3 405 + 403 Gaps:1 97.58 414 74.75 0.0 hypothetical protein
blastp_kegg lcl|mdm:103426970 1 404 + 404 Gaps:4 99.75 405 76.24 0.0 3'-5' exoribonuclease 1-like
blastp_kegg lcl|fve:101295945 1 404 + 404 Gaps:3 97.59 415 75.06 0.0 uncharacterized protein LOC101295945
blastp_kegg lcl|mdm:103438591 1 404 + 404 Gaps:4 97.58 414 75.99 0.0 uncharacterized LOC103438591
blastp_kegg lcl|pxb:103952092 1 404 + 404 Gaps:4 97.58 414 75.74 0.0 uncharacterized LOC103952092
blastp_kegg lcl|gmx:100811151 1 404 + 404 Gaps:2 97.58 414 73.76 0.0 uncharacterized LOC100811151
blastp_kegg lcl|gmx:100780340 1 404 + 404 Gaps:2 97.58 414 73.51 0.0 uncharacterized LOC100780340
blastp_pdb 1w0h_A 128 319 + 192 Gaps:6 96.08 204 37.76 7e-39 mol:protein length:204 3'-5' EXONUCLEASE ERI1
blastp_pdb 2xri_A 126 317 + 192 Gaps:4 86.61 224 39.18 1e-37 mol:protein length:224 ERI1 EXORIBONUCLEASE 3
blastp_pdb 1zbu_D 128 319 + 192 Gaps:4 56.16 349 35.71 1e-36 mol:protein length:349 3'-5' exonuclease ERI1
blastp_pdb 1zbu_C 128 319 + 192 Gaps:4 56.16 349 35.71 1e-36 mol:protein length:349 3'-5' exonuclease ERI1
blastp_pdb 1zbu_B 128 319 + 192 Gaps:4 56.16 349 35.71 1e-36 mol:protein length:349 3'-5' exonuclease ERI1
blastp_pdb 1zbu_A 128 319 + 192 Gaps:4 56.16 349 35.71 1e-36 mol:protein length:349 3'-5' exonuclease ERI1
blastp_pdb 1zbh_D 128 319 + 192 Gaps:6 65.55 299 36.73 8e-36 mol:protein length:299 3'-5' exonuclease ERI1
blastp_pdb 1zbh_C 128 319 + 192 Gaps:6 65.55 299 36.73 8e-36 mol:protein length:299 3'-5' exonuclease ERI1
blastp_pdb 1zbh_B 128 319 + 192 Gaps:6 65.55 299 36.73 8e-36 mol:protein length:299 3'-5' exonuclease ERI1
blastp_pdb 1zbh_A 128 319 + 192 Gaps:6 65.55 299 36.73 8e-36 mol:protein length:299 3'-5' exonuclease ERI1
blastp_uniprot_sprot sp|A8K979|ERI2_HUMAN 126 319 + 194 Gaps:17 30.54 691 42.65 1e-41 ERI1 exoribonuclease 2 OS Homo sapiens GN ERI2 PE 2 SV 2
blastp_uniprot_sprot sp|Q5HZL1|ERI2_XENLA 118 337 + 220 Gaps:21 33.62 687 40.69 2e-41 ERI1 exoribonuclease 2 OS Xenopus laevis GN eri2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5BKS4|ERI2_MOUSE 116 319 + 204 Gaps:18 32.27 688 40.09 3e-40 ERI1 exoribonuclease 2 OS Mus musculus GN Eri2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8IV48|ERI1_HUMAN 128 319 + 192 Gaps:6 56.16 349 37.76 2e-37 3'-5' exoribonuclease 1 OS Homo sapiens GN ERI1 PE 1 SV 3
blastp_uniprot_sprot sp|A6QLH5|ERI3_BOVIN 122 317 + 196 Gaps:4 58.75 337 39.39 2e-36 ERI1 exoribonuclease 3 OS Bos taurus GN ERI3 PE 2 SV 1
blastp_uniprot_sprot sp|O43414|ERI3_HUMAN 122 317 + 196 Gaps:4 58.75 337 39.39 2e-36 ERI1 exoribonuclease 3 OS Homo sapiens GN ERI3 PE 1 SV 2
blastp_uniprot_sprot sp|Q8C460|ERI3_MOUSE 123 317 + 195 Gaps:4 58.46 337 39.59 3e-36 ERI1 exoribonuclease 3 OS Mus musculus GN Eri3 PE 1 SV 1
blastp_uniprot_sprot sp|Q502M8|ERI2_DANRE 126 317 + 192 Gaps:15 37.30 555 38.65 1e-35 ERI1 exoribonuclease 2 OS Danio rerio GN eri2 PE 2 SV 1
blastp_uniprot_sprot sp|Q7TMF2|ERI1_MOUSE 128 320 + 193 Gaps:6 57.10 345 35.03 1e-34 3'-5' exoribonuclease 1 OS Mus musculus GN Eri1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5FVR4|ERI1_RAT 128 319 + 192 Gaps:6 56.81 345 34.69 2e-33 3'-5' exoribonuclease 1 OS Rattus norvegicus GN Eri1 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 126 318 193 G3DSA:3.30.420.10 none none IPR012337
SUPERFAMILY 128 317 190 SSF53098 none none IPR012337
Pfam 132 303 172 PF00929 none Exonuclease IPR013520
PANTHER 126 329 204 PTHR23044 none none none
SMART 130 312 183 SM00479 none none IPR006055
PANTHER 126 329 204 PTHR23044:SF30 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4

0 Targeting