Protein : Qrob_P0086230.2 Q. robur
Protein Identifier  ? Qrob_P0086230.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=5) K02941 - large subunit ribosomal protein LP0 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 230  
Kegg Orthology  K02941
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0042254 ribosome biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100250067 2 229 + 228 Gaps:18 76.88 320 84.15 2e-141 60S acidic ribosomal protein P0-like
blastp_kegg lcl|vvi:100254737 2 229 + 228 Gaps:18 76.88 320 82.11 5e-139 60S acidic ribosomal protein P0-like
blastp_kegg lcl|tcc:TCM_042569 2 229 + 228 Gaps:18 76.88 320 81.71 3e-138 Ribosomal protein L10 family protein isoform 1
blastp_kegg lcl|mtr:MTR_3g108280 2 229 + 228 Gaps:18 76.16 323 81.71 3e-138 60S acidic ribosomal protein p0
blastp_kegg lcl|csv:101214032 2 229 + 228 Gaps:18 76.88 320 80.49 5e-138 60S acidic ribosomal protein P0-like
blastp_kegg lcl|mtr:MTR_5g082180 2 229 + 228 Gaps:18 76.16 323 82.11 8e-138 60S acidic ribosomal protein p0
blastp_kegg lcl|rcu:RCOM_0592410 2 229 + 228 Gaps:18 76.88 320 81.71 1e-137 60S acidic ribosomal protein P0 putative (EC:4.2.99.18)
blastp_kegg lcl|cmo:103501429 2 229 + 228 Gaps:18 76.88 320 80.49 1e-137 60S acidic ribosomal protein P0
blastp_kegg lcl|cam:101497480 2 229 + 228 Gaps:18 76.64 321 81.71 2e-137 60S acidic ribosomal protein P0-like
blastp_kegg lcl|cam:101497146 2 229 + 228 Gaps:18 76.64 321 81.71 2e-137 60S acidic ribosomal protein P0-like
blastp_pdb 3izr_s 2 229 + 228 Gaps:18 77.12 319 74.80 2e-125 mol:protein length:319 60S acidic ribosomal protein P0 (L10p)
blastp_pdb 2zkr_g 2 229 + 228 Gaps:20 76.97 317 48.77 4e-70 mol:protein length:317 60S acidic ribosomal protein P0
blastp_pdb 3j16_G 2 229 + 228 Gaps:22 78.21 312 40.57 1e-56 mol:protein length:312 60S ribosomal protein L10
blastp_pdb 3izs_s 2 229 + 228 Gaps:22 78.21 312 40.57 1e-56 mol:protein length:312 60S acidic ribosomal protein rpP0 (L10P)
blastp_pdb 3o5h_M 2 229 + 228 Gaps:22 78.21 312 40.16 2e-55 mol:protein length:312 60S acidic ribosomal protein P0
blastp_pdb 3u5i_q 2 229 + 228 Gaps:22 78.21 312 36.89 3e-45 mol:protein length:312 60S acidic ribosomal protein P0
blastp_pdb 3i56_G 2 229 + 228 Gaps:24 69.54 348 24.38 9e-20 mol:protein length:348 50S ribosomal protein L10E
blastp_pdb 3i55_G 2 229 + 228 Gaps:24 69.54 348 24.38 9e-20 mol:protein length:348 50S ribosomal protein L10E
blastp_pdb 3g71_G 2 229 + 228 Gaps:24 69.54 348 24.38 9e-20 mol:protein length:348 50S ribosomal protein L10E
blastp_pdb 3g6e_G 2 229 + 228 Gaps:24 69.54 348 24.38 9e-20 mol:protein length:348 50S ribosomal protein L10E
blastp_uniprot_sprot sp|O04204|RLA01_ARATH 2 229 + 228 Gaps:18 77.60 317 79.67 3e-137 60S acidic ribosomal protein P0-1 OS Arabidopsis thaliana GN RPP0A PE 1 SV 1
blastp_uniprot_sprot sp|P50346|RLA0_SOYBN 2 229 + 228 Gaps:18 76.88 320 80.08 1e-136 60S acidic ribosomal protein P0 OS Glycine max PE 1 SV 1
blastp_uniprot_sprot sp|Q42112|RLA02_ARATH 2 229 + 228 Gaps:18 76.88 320 78.86 2e-136 60S acidic ribosomal protein P0-2 OS Arabidopsis thaliana GN RPP0B PE 1 SV 2
blastp_uniprot_sprot sp|P57691|RLA03_ARATH 2 229 + 228 Gaps:18 76.16 323 78.05 3e-135 60S acidic ribosomal protein P0-3 OS Arabidopsis thaliana GN RPP0C PE 1 SV 1
blastp_uniprot_sprot sp|P41095|RLA0_ORYSJ 2 229 + 228 Gaps:18 77.12 319 74.80 9e-125 60S acidic ribosomal protein P0 OS Oryza sativa subsp. japonica GN Os08g0130500 PE 1 SV 3
blastp_uniprot_sprot sp|P50345|RLA0_LUPLU 2 229 + 228 Gaps:18 76.40 322 74.80 1e-123 60S acidic ribosomal protein P0 OS Lupinus luteus PE 2 SV 1
blastp_uniprot_sprot sp|O24573|RLA0_MAIZE 2 229 + 228 Gaps:18 77.12 319 72.36 2e-117 60S acidic ribosomal protein P0 OS Zea mays GN RP-P0 PE 1 SV 3
blastp_uniprot_sprot sp|P29764|RLA0_OXYRB 2 208 + 207 Gaps:18 70.09 321 72.89 2e-110 60S acidic ribosomal protein P0 OS Oxybasis rubra PE 2 SV 1
blastp_uniprot_sprot sp|Q9U3U0|RLA0_CERCA 2 228 + 227 Gaps:20 76.66 317 50.62 7e-78 60S acidic ribosomal protein P0 OS Ceratitis capitata GN RpLP0 PE 3 SV 1
blastp_uniprot_sprot sp|Q9DG68|RLA0_RANSY 2 229 + 228 Gaps:20 77.46 315 50.00 1e-76 60S acidic ribosomal protein P0 OS Rana sylvatica GN RPLP0 PE 2 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 225 224 PTHR21141 none none none
PANTHER 2 225 224 PTHR21141:SF3 none none none
Pfam 3 92 90 PF00466 none Ribosomal protein L10 IPR001790
SUPERFAMILY 4 108 105 SSF160369 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting