Protein : Qrob_P0082250.2 Q. robur
Protein Identifier  ? Qrob_P0082250.2 Organism . Name  Quercus robur
Score  87.0 Score Type  egn
Protein Description  (M=1) PTHR11711//PTHR11711:SF153 - ADP RIBOSYLATION FACTOR-RELATED // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 85  
Kegg Orthology  K07937
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101232198 1 73 + 73 none 80.22 91 98.63 8e-44 ADP-ribosylation factor 2-like
blastp_kegg lcl|pda:103722662 1 73 + 73 none 62.93 116 100.00 1e-43 ADP-ribosylation factor 1-like
blastp_kegg lcl|mdm:103430855 1 76 + 76 Gaps:1 76.53 98 100.00 2e-43 ADP-ribosylation factor 1-like
blastp_kegg lcl|cic:CICLE_v10017502mg 1 76 + 76 none 41.53 183 94.74 2e-43 hypothetical protein
blastp_kegg lcl|crb:CARUB_v10010344mg 1 73 + 73 none 43.45 168 98.63 3e-43 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_004G011900g 1 73 + 73 none 40.33 181 100.00 3e-43 hypothetical protein
blastp_kegg lcl|mdm:103444296 1 73 + 73 none 38.83 188 100.00 4e-43 ARF ADP-ribosylation factor
blastp_kegg lcl|sot:102577686 1 73 + 73 none 40.33 181 100.00 4e-43 ADP-ribosylation factor 1-like protein
blastp_kegg lcl|pop:POPTR_0013s00700g 1 73 + 73 none 40.33 181 100.00 4e-43 ADP-ribosylation factor family protein
blastp_kegg lcl|pop:POPTR_0005s00910g 1 73 + 73 none 40.33 181 100.00 4e-43 hypothetical protein
blastp_pdb 3aq4_B 1 73 + 73 none 39.67 184 98.63 4e-44 mol:protein length:184 ADP-ribosylation factor 1
blastp_pdb 3aq4_A 1 73 + 73 none 39.67 184 98.63 4e-44 mol:protein length:184 ADP-ribosylation factor 1
blastp_pdb 1z6x_B 1 73 + 73 none 40.56 180 89.04 2e-40 mol:protein length:180 ADP-ribosylation factor 4
blastp_pdb 1z6x_A 1 73 + 73 none 40.56 180 89.04 2e-40 mol:protein length:180 ADP-ribosylation factor 4
blastp_pdb 1rrg_B 1 73 + 73 none 40.33 181 90.41 1e-38 mol:protein length:181 RAT ADP-RIBOSYLATION FACTOR-1
blastp_pdb 1rrg_A 1 73 + 73 none 40.33 181 90.41 1e-38 mol:protein length:181 RAT ADP-RIBOSYLATION FACTOR-1
blastp_pdb 1rrf_A 1 73 + 73 none 40.33 181 90.41 1e-38 mol:protein length:181 RAT ADP-RIBOSYLATION FACTOR-1
blastp_pdb 1r8q_B 1 73 + 73 none 40.33 181 90.41 1e-38 mol:protein length:181 ADP-ribosylation factor 1
blastp_pdb 1r8q_A 1 73 + 73 none 40.33 181 90.41 1e-38 mol:protein length:181 ADP-ribosylation factor 1
blastp_pdb 3lrp_A 1 73 + 73 none 40.33 181 83.56 5e-38 mol:protein length:181 ADP-ribosylation factor 1
blastp_uniprot_sprot sp|O48920|ARF_VIGUN 1 73 + 73 none 40.33 181 100.00 1e-44 ADP-ribosylation factor OS Vigna unguiculata GN ARF PE 2 SV 3
blastp_uniprot_sprot sp|P51822|ARF1_DAUCA 1 73 + 73 none 40.33 181 100.00 2e-44 ADP-ribosylation factor 1 OS Daucus carota GN ARF1 PE 2 SV 2
blastp_uniprot_sprot sp|Q06396|ARF1_ORYSJ 1 73 + 73 none 40.33 181 98.63 4e-44 ADP-ribosylation factor 1 OS Oryza sativa subsp. japonica GN Os01g0813400 PE 2 SV 3
blastp_uniprot_sprot sp|P51823|ARF2_ORYSJ 1 73 + 73 none 40.33 181 98.63 5e-44 ADP-ribosylation factor 2 OS Oryza sativa subsp. japonica GN ARF PE 2 SV 2
blastp_uniprot_sprot sp|P49076|ARF_MAIZE 1 73 + 73 none 40.33 181 98.63 7e-44 ADP-ribosylation factor OS Zea mays GN ARF1 PE 2 SV 2
blastp_uniprot_sprot sp|P0DH91|ARF2B_ARATH 1 73 + 73 none 40.33 181 98.63 9e-44 ADP-ribosylation factor 2-B OS Arabidopsis thaliana GN ARF2-B PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQC8|ARF2A_ARATH 1 73 + 73 none 40.33 181 98.63 9e-44 ADP-ribosylation factor 2-A OS Arabidopsis thaliana GN ARF2-A PE 2 SV 2
blastp_uniprot_sprot sp|P36397|ARF1_ARATH 1 73 + 73 none 40.33 181 98.63 2e-43 ADP-ribosylation factor 1 OS Arabidopsis thaliana GN ARF1 PE 1 SV 2
blastp_uniprot_sprot sp|O23778|ARF1_CATRO 1 73 + 73 none 40.33 181 95.89 2e-42 ADP-ribosylation factor 1 OS Catharanthus roseus GN ARF1 PE 2 SV 3
blastp_uniprot_sprot sp|P51824|ARF1_SOLTU 1 73 + 73 none 37.06 197 95.89 2e-42 ADP-ribosylation factor 1 OS Solanum tuberosum PE 2 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 81 81 PTHR11711:SF153 none none none
Pfam 5 73 69 PF00025 none ADP-ribosylation factor family IPR006689
SUPERFAMILY 14 73 60 SSF52540 none none IPR027417
Gene3D 1 73 73 G3DSA:3.40.50.300 none none IPR027417
TIGRFAM 16 74 59 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
PANTHER 1 81 81 PTHR11711 none none none
SMART 1 84 84 SM00177 none ARF-like small GTPases IPR024156
PRINTS 19 42 24 PR00328 none GTP-binding SAR1 protein signature IPR006689
PRINTS 47 71 25 PR00328 none GTP-binding SAR1 protein signature IPR006689

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting