Protein : Qrob_P0082220.2 Q. robur
Protein Identifier  ? Qrob_P0082220.2 Organism . Name  Quercus robur
Protein Description  (M=10) K09873 - aquaporin TIP Alias (in v1)  Qrob_P0880820.1
Gene Prediction Quality  manual_v2 Protein length 

Sequence

Length: 268  
Kegg Orthology  K09873
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0 Synonyms

0 GO Terms

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0801990 1 267 + 267 Gaps:20 100.00 247 74.90 1e-123 tonoplast intrinsic protein putative
blastp_kegg lcl|cam:101505122 1 267 + 267 Gaps:20 100.00 247 71.66 1e-114 aquaporin TIP4-1-like
blastp_kegg lcl|cic:CICLE_v10009294mg 1 267 + 267 Gaps:20 100.00 247 76.11 2e-114 hypothetical protein
blastp_kegg lcl|cit:102611770 1 267 + 267 Gaps:20 100.00 247 76.11 3e-114 aquaporin TIP4-1-like
blastp_kegg lcl|pop:POPTR_0006s25620g 1 267 + 267 Gaps:20 100.00 247 74.49 5e-114 POPTRDRAFT_561759 aquaporin TIP4.1 family protein
blastp_kegg lcl|tcc:TCM_037180 1 267 + 267 Gaps:20 100.00 247 74.90 6e-114 Tonoplast intrinsic protein 4 1
blastp_kegg lcl|fve:101303768 1 265 + 265 Gaps:22 99.60 248 72.06 4e-113 aquaporin TIP4-1-like
blastp_kegg lcl|csv:101224113 1 267 + 267 Gaps:20 100.00 247 73.28 7e-109 aquaporin TIP4-1-like
blastp_kegg lcl|csv:101205380 1 267 + 267 Gaps:20 100.00 247 73.28 1e-108 aquaporin TIP4-1-like
blastp_kegg lcl|cmo:103488186 1 267 + 267 Gaps:20 100.00 247 73.28 1e-107 aquaporin TIP4-1
blastp_pdb 2d57_A 78 252 + 175 Gaps:13 59.14 301 42.13 2e-32 mol:protein length:301 Aquaporin-4
blastp_pdb 2zz9_A 78 252 + 175 Gaps:13 59.14 301 42.13 2e-32 mol:protein length:301 Aquaporin-4
blastp_pdb 1j4n_A 78 256 + 179 Gaps:5 67.16 271 42.31 2e-32 mol:protein length:271 AQUAPORIN 1
blastp_pdb 1ih5_A 78 256 + 179 Gaps:5 67.66 269 42.31 3e-32 mol:protein length:269 AQUAPORIN-1
blastp_pdb 1h6i_A 78 256 + 179 Gaps:5 67.66 269 42.31 3e-32 mol:protein length:269 AQUAPORIN-1
blastp_pdb 1fqy_A 78 256 + 179 Gaps:5 67.66 269 42.31 3e-32 mol:protein length:269 AQUAPORIN-1
blastp_pdb 3gd8_A 78 252 + 175 Gaps:13 79.82 223 42.13 6e-32 mol:protein length:223 Aquaporin-4
blastp_pdb 3iyz_A 78 252 + 175 Gaps:13 52.35 340 42.13 7e-32 mol:protein length:340 Aquaporin-4
blastp_pdb 2c32_A 78 255 + 178 Gaps:9 68.82 263 38.67 4e-31 mol:protein length:263 LENS FIBER MAJOR INTRINSIC PROTEIN
blastp_pdb 2b6p_A 78 255 + 178 Gaps:9 68.82 263 38.67 4e-31 mol:protein length:263 Lens fiber major intrinsic protein
blastp_uniprot_sprot sp|O82316|TIP41_ARATH 1 265 + 265 Gaps:20 98.39 249 70.61 6e-105 Aquaporin TIP4-1 OS Arabidopsis thaliana GN TIP4-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q75GA5|TIP41_ORYSJ 78 260 + 183 Gaps:3 73.31 251 65.22 4e-77 Probable aquaporin TIP4-1 OS Oryza sativa subsp. japonica GN TIP4-1 PE 2 SV 1
blastp_uniprot_sprot sp|P25818|TIP11_ARATH 3 264 + 262 Gaps:18 98.01 251 52.85 2e-74 Aquaporin TIP1-1 OS Arabidopsis thaliana GN TIP1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ATL3|TIP44_MAIZE 1 267 + 267 Gaps:35 100.00 252 52.78 8e-72 Aquaporin TIP4-4 OS Zea mays GN TIP4-4 PE 2 SV 1
blastp_uniprot_sprot sp|P33560|TIP_ANTMA 1 265 + 265 Gaps:17 99.20 250 51.21 2e-71 Probable aquaporin TIP-type OS Antirrhinum majus GN DIP PE 2 SV 1
blastp_uniprot_sprot sp|P21653|TIP1_TOBAC 1 265 + 265 Gaps:17 99.20 250 51.21 6e-71 Probable aquaporin TIP-type RB7-5A OS Nicotiana tabacum PE 1 SV 1
blastp_uniprot_sprot sp|Q41951|TIP21_ARATH 1 264 + 264 Gaps:17 99.60 250 49.80 1e-70 Aquaporin TIP2-1 OS Arabidopsis thaliana GN TIP2-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9ATL5|TIP42_MAIZE 86 260 + 175 Gaps:3 68.48 257 60.23 4e-70 Aquaporin TIP4-2 OS Zea mays GN TIP4-2 PE 2 SV 1
blastp_uniprot_sprot sp|P24422|TIP2_TOBAC 1 265 + 265 Gaps:17 99.20 250 50.81 2e-69 Probable aquaporin TIP-type RB7-18C OS Nicotiana tabacum PE 1 SV 2
blastp_uniprot_sprot sp|Q9ATL4|TIP43_MAIZE 71 264 + 194 Gaps:4 78.71 249 58.67 4e-69 Aquaporin TIP4-3 OS Zea mays GN TIP4-3 PE 2 SV 1

0 Domain Motifs

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 72   Secretory pathway 5 0.758 0.029 NON-PLANT 72